Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4243 and EX28DRAFT_4244 are separated by 646 nucleotides EX28DRAFT_4244 and EX28DRAFT_4245 are separated by 61 nucleotides EX28DRAFT_4245 and EX28DRAFT_4246 are separated by 250 nucleotides
EX28DRAFT_4243: EX28DRAFT_4243 - Predicted signal transduction protein containing sensor and EAL domains, at 49,246 to 50,811
_4243
EX28DRAFT_4244: EX28DRAFT_4244 - hypothetical protein, at 51,458 to 51,739
_4244
EX28DRAFT_4245: EX28DRAFT_4245 - single stranded DNA-binding protein (ssb), at 51,801 to 52,331
_4245
EX28DRAFT_4246: EX28DRAFT_4246 - excinuclease ABC, A subunit, at 52,582 to 55,404
_4246
Position (kb)
51
52 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 50.565 kb on + strand, within EX28DRAFT_4243 at 50.565 kb on + strand, within EX28DRAFT_4243 at 50.565 kb on + strand, within EX28DRAFT_4243 at 50.567 kb on + strand, within EX28DRAFT_4243 at 50.568 kb on - strand, within EX28DRAFT_4243 at 50.568 kb on - strand, within EX28DRAFT_4243 at 50.568 kb on - strand, within EX28DRAFT_4243 at 50.568 kb on - strand, within EX28DRAFT_4243 at 50.687 kb on - strand at 50.754 kb on + strand at 50.754 kb on + strand at 50.755 kb on - strand at 50.758 kb on + strand at 50.758 kb on + strand at 50.758 kb on + strand at 50.759 kb on - strand at 50.759 kb on - strand at 50.759 kb on - strand at 50.759 kb on - strand at 50.774 kb on - strand at 50.821 kb on + strand at 50.846 kb on + strand at 50.849 kb on + strand at 50.922 kb on - strand at 50.925 kb on - strand at 51.097 kb on - strand at 51.331 kb on + strand at 51.673 kb on + strand, within EX28DRAFT_4244 at 51.673 kb on + strand, within EX28DRAFT_4244 at 51.674 kb on - strand, within EX28DRAFT_4244 at 51.733 kb on + strand at 51.734 kb on - strand at 52.509 kb on + strand at 52.510 kb on - strand at 52.510 kb on - strand at 52.510 kb on - strand at 52.630 kb on - strand at 52.717 kb on + strand at 52.738 kb on + strand at 52.739 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 50,565 + EX28DRAFT_4243 0.84 +0.5 50,565 + EX28DRAFT_4243 0.84 -0.3 50,565 + EX28DRAFT_4243 0.84 -0.5 50,567 + EX28DRAFT_4243 0.84 -0.5 50,568 - EX28DRAFT_4243 0.84 +0.5 50,568 - EX28DRAFT_4243 0.84 -1.9 50,568 - EX28DRAFT_4243 0.84 -0.7 50,568 - EX28DRAFT_4243 0.84 -0.0 50,687 - -0.9 50,754 + -0.7 50,754 + -0.2 50,755 - -0.3 50,758 + -0.2 50,758 + -0.4 50,758 + +0.3 50,759 - +0.9 50,759 - -0.7 50,759 - -0.6 50,759 - +0.1 50,774 - -2.1 50,821 + -0.1 50,846 + -0.1 50,849 + +0.4 50,922 - +0.2 50,925 - -1.4 51,097 - -0.1 51,331 + +0.3 51,673 + EX28DRAFT_4244 0.76 +1.6 51,673 + EX28DRAFT_4244 0.76 -0.0 51,674 - EX28DRAFT_4244 0.77 +0.5 51,733 + -4.5 51,734 - +0.1 52,509 + -0.8 52,510 - -0.3 52,510 - -0.2 52,510 - -0.1 52,630 - -0.8 52,717 + -0.9 52,738 + +0.3 52,739 - -0.3
Or see this region's nucleotide sequence