Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4133 and EX28DRAFT_4134 are separated by 30 nucleotides EX28DRAFT_4134 and EX28DRAFT_4135 are separated by 206 nucleotides EX28DRAFT_4135 and EX28DRAFT_4136 are separated by 8 nucleotides
EX28DRAFT_4133: EX28DRAFT_4133 - ferrous iron transporter FeoB, at 111,703 to 114,021
_4133
EX28DRAFT_4134: EX28DRAFT_4134 - Fe2+ transport system protein A, at 114,052 to 114,279
_4134
EX28DRAFT_4135: EX28DRAFT_4135 - hypothetical protein, at 114,486 to 114,608
_4135
EX28DRAFT_4136: EX28DRAFT_4136 - Transcriptional accessory protein, at 114,617 to 116,947
_4136
Position (kb) 114
115 Strain fitness (log2 ratio) -2
-1
0
1
2 at 113.059 kb on - strand, within EX28DRAFT_4133 at 113.144 kb on + strand, within EX28DRAFT_4133 at 113.144 kb on + strand, within EX28DRAFT_4133 at 113.145 kb on - strand, within EX28DRAFT_4133 at 113.145 kb on - strand, within EX28DRAFT_4133 at 113.145 kb on - strand, within EX28DRAFT_4133 at 113.381 kb on + strand, within EX28DRAFT_4133 at 113.381 kb on + strand, within EX28DRAFT_4133 at 113.381 kb on + strand, within EX28DRAFT_4133 at 113.381 kb on + strand, within EX28DRAFT_4133 at 113.382 kb on - strand, within EX28DRAFT_4133 at 113.385 kb on + strand, within EX28DRAFT_4133 at 113.714 kb on + strand, within EX28DRAFT_4133 at 113.715 kb on - strand, within EX28DRAFT_4133 at 113.722 kb on - strand, within EX28DRAFT_4133 at 113.781 kb on + strand, within EX28DRAFT_4133 at 113.782 kb on - strand, within EX28DRAFT_4133 at 113.784 kb on - strand, within EX28DRAFT_4133 at 113.902 kb on - strand at 113.986 kb on - strand at 113.998 kb on + strand at 114.007 kb on - strand at 114.076 kb on + strand, within EX28DRAFT_4134 at 114.096 kb on + strand, within EX28DRAFT_4134 at 114.112 kb on + strand, within EX28DRAFT_4134 at 114.307 kb on + strand at 114.308 kb on - strand at 114.312 kb on - strand at 114.352 kb on + strand at 114.381 kb on - strand at 114.383 kb on + strand at 114.465 kb on + strand at 114.503 kb on + strand, within EX28DRAFT_4135 at 114.503 kb on + strand, within EX28DRAFT_4135 at 114.506 kb on - strand, within EX28DRAFT_4135 at 114.910 kb on + strand, within EX28DRAFT_4136 at 115.213 kb on + strand, within EX28DRAFT_4136 at 115.214 kb on - strand, within EX28DRAFT_4136
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 113,059 - EX28DRAFT_4133 0.58 +0.0 113,144 + EX28DRAFT_4133 0.62 +0.5 113,144 + EX28DRAFT_4133 0.62 +0.3 113,145 - EX28DRAFT_4133 0.62 +0.5 113,145 - EX28DRAFT_4133 0.62 +0.4 113,145 - EX28DRAFT_4133 0.62 +0.6 113,381 + EX28DRAFT_4133 0.72 +1.0 113,381 + EX28DRAFT_4133 0.72 -0.7 113,381 + EX28DRAFT_4133 0.72 -0.3 113,381 + EX28DRAFT_4133 0.72 +0.0 113,382 - EX28DRAFT_4133 0.72 +0.5 113,385 + EX28DRAFT_4133 0.73 +0.5 113,714 + EX28DRAFT_4133 0.87 +0.2 113,715 - EX28DRAFT_4133 0.87 +0.3 113,722 - EX28DRAFT_4133 0.87 +0.2 113,781 + EX28DRAFT_4133 0.90 +0.3 113,782 - EX28DRAFT_4133 0.90 +1.0 113,784 - EX28DRAFT_4133 0.90 -2.4 113,902 - +0.2 113,986 - +0.3 113,998 + -0.9 114,007 - -0.2 114,076 + EX28DRAFT_4134 0.11 +0.5 114,096 + EX28DRAFT_4134 0.19 +0.4 114,112 + EX28DRAFT_4134 0.26 +0.4 114,307 + +1.6 114,308 - +0.0 114,312 - -0.5 114,352 + +0.0 114,381 - +0.8 114,383 + +2.1 114,465 + +0.4 114,503 + EX28DRAFT_4135 0.14 +0.7 114,503 + EX28DRAFT_4135 0.14 +1.5 114,506 - EX28DRAFT_4135 0.16 -0.1 114,910 + EX28DRAFT_4136 0.13 -2.6 115,213 + EX28DRAFT_4136 0.26 +0.4 115,214 - EX28DRAFT_4136 0.26 +0.6
Or see this region's nucleotide sequence