Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4121 and EX28DRAFT_4122 are separated by 47 nucleotides EX28DRAFT_4122 and EX28DRAFT_4123 are separated by 16 nucleotides EX28DRAFT_4123 and EX28DRAFT_4124 are separated by 62 nucleotides
EX28DRAFT_4121: EX28DRAFT_4121 - Rhodanese-related sulfurtransferase, at 97,321 to 97,653
_4121
EX28DRAFT_4122: EX28DRAFT_4122 - rhomboid family protease GlpG, at 97,701 to 98,531
_4122
EX28DRAFT_4123: EX28DRAFT_4123 - transcriptional regulator, DeoR family, at 98,548 to 99,306
_4123
EX28DRAFT_4124: EX28DRAFT_4124 - ATP-dependent transcriptional regulator, at 99,369 to 102,074
_4124
Position (kb) 98
99
100 Strain fitness (log2 ratio) -6
-5
-4
-3
-2
-1
0
1 at 97.549 kb on + strand, within EX28DRAFT_4121 at 97.580 kb on - strand, within EX28DRAFT_4121 at 97.580 kb on - strand, within EX28DRAFT_4121 at 97.580 kb on - strand, within EX28DRAFT_4121 at 97.636 kb on + strand at 97.662 kb on + strand at 97.662 kb on + strand at 97.662 kb on + strand at 97.662 kb on + strand at 97.662 kb on + strand at 97.663 kb on - strand at 97.663 kb on - strand at 97.721 kb on + strand at 97.721 kb on + strand at 97.722 kb on - strand at 97.757 kb on + strand at 97.796 kb on + strand, within EX28DRAFT_4122 at 97.796 kb on + strand, within EX28DRAFT_4122 at 98.027 kb on + strand, within EX28DRAFT_4122 at 98.030 kb on + strand, within EX28DRAFT_4122 at 98.179 kb on - strand, within EX28DRAFT_4122 at 98.313 kb on + strand, within EX28DRAFT_4122 at 98.313 kb on + strand, within EX28DRAFT_4122 at 98.313 kb on + strand, within EX28DRAFT_4122 at 98.314 kb on - strand, within EX28DRAFT_4122 at 98.314 kb on - strand, within EX28DRAFT_4122 at 98.328 kb on + strand, within EX28DRAFT_4122 at 98.328 kb on + strand, within EX28DRAFT_4122 at 98.329 kb on - strand, within EX28DRAFT_4122 at 98.370 kb on + strand, within EX28DRAFT_4122 at 98.371 kb on - strand, within EX28DRAFT_4122 at 98.387 kb on - strand, within EX28DRAFT_4122 at 98.387 kb on - strand, within EX28DRAFT_4122 at 98.444 kb on + strand, within EX28DRAFT_4122 at 98.529 kb on + strand at 98.529 kb on + strand at 98.602 kb on + strand at 98.836 kb on - strand, within EX28DRAFT_4123 at 99.133 kb on - strand, within EX28DRAFT_4123 at 99.279 kb on + strand at 99.524 kb on - strand at 99.532 kb on + strand at 99.863 kb on - strand, within EX28DRAFT_4124 at 99.963 kb on + strand, within EX28DRAFT_4124 at 100.028 kb on + strand, within EX28DRAFT_4124 at 100.100 kb on - strand, within EX28DRAFT_4124 at 100.140 kb on - strand, within EX28DRAFT_4124
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 97,549 + EX28DRAFT_4121 0.68 -0.0 97,580 - EX28DRAFT_4121 0.78 -3.0 97,580 - EX28DRAFT_4121 0.78 -2.6 97,580 - EX28DRAFT_4121 0.78 -1.6 97,636 + -0.2 97,662 + -0.1 97,662 + +0.5 97,662 + -1.0 97,662 + +0.4 97,662 + +0.1 97,663 - -2.6 97,663 - -2.6 97,721 + -4.0 97,721 + -0.5 97,722 - -1.2 97,757 + +0.6 97,796 + EX28DRAFT_4122 0.11 +0.1 97,796 + EX28DRAFT_4122 0.11 +0.1 98,027 + EX28DRAFT_4122 0.39 +0.4 98,030 + EX28DRAFT_4122 0.40 +0.9 98,179 - EX28DRAFT_4122 0.58 -0.5 98,313 + EX28DRAFT_4122 0.74 +0.2 98,313 + EX28DRAFT_4122 0.74 +1.1 98,313 + EX28DRAFT_4122 0.74 +0.4 98,314 - EX28DRAFT_4122 0.74 -1.4 98,314 - EX28DRAFT_4122 0.74 -0.4 98,328 + EX28DRAFT_4122 0.75 -0.0 98,328 + EX28DRAFT_4122 0.75 +0.8 98,329 - EX28DRAFT_4122 0.76 -1.0 98,370 + EX28DRAFT_4122 0.81 +0.7 98,371 - EX28DRAFT_4122 0.81 -1.8 98,387 - EX28DRAFT_4122 0.83 +0.2 98,387 - EX28DRAFT_4122 0.83 -0.6 98,444 + EX28DRAFT_4122 0.89 -1.0 98,529 + +0.2 98,529 + -1.3 98,602 + +1.3 98,836 - EX28DRAFT_4123 0.38 -5.5 99,133 - EX28DRAFT_4123 0.77 -5.8 99,279 + -4.6 99,524 - -1.9 99,532 + +0.3 99,863 - EX28DRAFT_4124 0.18 +0.5 99,963 + EX28DRAFT_4124 0.22 +0.4 100,028 + EX28DRAFT_4124 0.24 +0.5 100,100 - EX28DRAFT_4124 0.27 -0.6 100,140 - EX28DRAFT_4124 0.28 +0.3
Or see this region's nucleotide sequence