Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4093 and EX28DRAFT_4094 are separated by 1 nucleotides EX28DRAFT_4094 and EX28DRAFT_4095 overlap by 4 nucleotides EX28DRAFT_4095 and EX28DRAFT_4096 overlap by 32 nucleotides EX28DRAFT_4096 and EX28DRAFT_4097 overlap by 4 nucleotides EX28DRAFT_4097 and EX28DRAFT_4098 are separated by 3 nucleotides
EX28DRAFT_4093: EX28DRAFT_4093 - 3-oxoacyl-(acyl-carrier-protein) synthase, at 66,799 to 67,968
_4093
EX28DRAFT_4094: EX28DRAFT_4094 - Protein of unknown function (DUF3261), at 67,970 to 68,548
_4094
EX28DRAFT_4095: EX28DRAFT_4095 - Predicted exporter, at 68,545 to 70,869
_4095
EX28DRAFT_4096: EX28DRAFT_4096 - Outer membrane lipoprotein-sorting protein, at 70,838 to 71,443
_4096
EX28DRAFT_4097: EX28DRAFT_4097 - Predicted thioesterase, at 71,440 to 71,862
_4097
EX28DRAFT_4098: EX28DRAFT_4098 - Predicted acyltransferase, at 71,866 to 73,557
_4098
Position (kb) 68
69
70
71 Strain fitness (log2 ratio) -2
-1
0
1 at 67.871 kb on + strand at 67.871 kb on + strand at 67.872 kb on - strand at 67.872 kb on - strand at 67.872 kb on - strand at 67.959 kb on + strand at 67.960 kb on - strand at 67.960 kb on - strand at 67.961 kb on + strand at 67.961 kb on + strand at 67.961 kb on + strand at 67.962 kb on - strand at 67.962 kb on - strand at 67.983 kb on + strand at 67.984 kb on - strand at 67.984 kb on - strand at 68.001 kb on + strand at 68.001 kb on + strand at 68.002 kb on - strand at 68.243 kb on - strand, within EX28DRAFT_4094 at 68.262 kb on + strand, within EX28DRAFT_4094 at 68.550 kb on + strand at 68.762 kb on + strand at 68.763 kb on - strand at 68.766 kb on + strand at 68.954 kb on - strand, within EX28DRAFT_4095 at 69.057 kb on - strand, within EX28DRAFT_4095 at 69.267 kb on + strand, within EX28DRAFT_4095 at 69.268 kb on - strand, within EX28DRAFT_4095 at 69.268 kb on - strand, within EX28DRAFT_4095 at 69.815 kb on - strand, within EX28DRAFT_4095 at 69.875 kb on + strand, within EX28DRAFT_4095 at 69.876 kb on - strand, within EX28DRAFT_4095 at 69.876 kb on - strand, within EX28DRAFT_4095 at 69.876 kb on - strand, within EX28DRAFT_4095 at 69.878 kb on + strand, within EX28DRAFT_4095 at 69.878 kb on + strand, within EX28DRAFT_4095 at 69.887 kb on + strand, within EX28DRAFT_4095 at 70.197 kb on + strand, within EX28DRAFT_4095 at 70.268 kb on + strand, within EX28DRAFT_4095 at 70.269 kb on - strand, within EX28DRAFT_4095 at 70.422 kb on - strand, within EX28DRAFT_4095 at 70.805 kb on - strand at 70.959 kb on + strand, within EX28DRAFT_4096 at 70.960 kb on - strand, within EX28DRAFT_4096 at 71.056 kb on + strand, within EX28DRAFT_4096 at 71.147 kb on - strand, within EX28DRAFT_4096 at 71.471 kb on - strand at 71.513 kb on - strand, within EX28DRAFT_4097 at 71.628 kb on + strand, within EX28DRAFT_4097 at 71.629 kb on - strand, within EX28DRAFT_4097 at 71.629 kb on - strand, within EX28DRAFT_4097 at 71.762 kb on + strand, within EX28DRAFT_4097 at 71.771 kb on + strand, within EX28DRAFT_4097 at 71.771 kb on + strand, within EX28DRAFT_4097 at 71.771 kb on + strand, within EX28DRAFT_4097 at 71.772 kb on - strand, within EX28DRAFT_4097 at 71.799 kb on + strand, within EX28DRAFT_4097 at 71.868 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 67,871 + +0.0 67,871 + -2.0 67,872 - +1.3 67,872 - +0.2 67,872 - +0.9 67,959 + +0.9 67,960 - +0.1 67,960 - -0.7 67,961 + -0.6 67,961 + -2.1 67,961 + +0.2 67,962 - +0.2 67,962 - -0.1 67,983 + +1.4 67,984 - +0.8 67,984 - -0.4 68,001 + +0.1 68,001 + -1.4 68,002 - -1.0 68,243 - EX28DRAFT_4094 0.47 -0.9 68,262 + EX28DRAFT_4094 0.50 -0.5 68,550 + +0.3 68,762 + -0.4 68,763 - +1.1 68,766 + +0.7 68,954 - EX28DRAFT_4095 0.18 +0.2 69,057 - EX28DRAFT_4095 0.22 +0.7 69,267 + EX28DRAFT_4095 0.31 -0.4 69,268 - EX28DRAFT_4095 0.31 -0.7 69,268 - EX28DRAFT_4095 0.31 +0.1 69,815 - EX28DRAFT_4095 0.55 +0.9 69,875 + EX28DRAFT_4095 0.57 +0.0 69,876 - EX28DRAFT_4095 0.57 +0.2 69,876 - EX28DRAFT_4095 0.57 +1.1 69,876 - EX28DRAFT_4095 0.57 -0.9 69,878 + EX28DRAFT_4095 0.57 +0.3 69,878 + EX28DRAFT_4095 0.57 +0.3 69,887 + EX28DRAFT_4095 0.58 +0.1 70,197 + EX28DRAFT_4095 0.71 -0.0 70,268 + EX28DRAFT_4095 0.74 +0.8 70,269 - EX28DRAFT_4095 0.74 +0.1 70,422 - EX28DRAFT_4095 0.81 -0.2 70,805 - -0.9 70,959 + EX28DRAFT_4096 0.20 -0.1 70,960 - EX28DRAFT_4096 0.20 +0.5 71,056 + EX28DRAFT_4096 0.36 -0.7 71,147 - EX28DRAFT_4096 0.51 +1.0 71,471 - +0.5 71,513 - EX28DRAFT_4097 0.17 -1.3 71,628 + EX28DRAFT_4097 0.44 -0.4 71,629 - EX28DRAFT_4097 0.45 -0.0 71,629 - EX28DRAFT_4097 0.45 +0.6 71,762 + EX28DRAFT_4097 0.76 -0.6 71,771 + EX28DRAFT_4097 0.78 -0.4 71,771 + EX28DRAFT_4097 0.78 -1.2 71,771 + EX28DRAFT_4097 0.78 -0.5 71,772 - EX28DRAFT_4097 0.78 -0.1 71,799 + EX28DRAFT_4097 0.85 +0.2 71,868 - +0.5
Or see this region's nucleotide sequence