Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4059 and EX28DRAFT_4060 are separated by 59 nucleotides EX28DRAFT_4060 and EX28DRAFT_4061 are separated by 181 nucleotides
EX28DRAFT_4059: EX28DRAFT_4059 - hypothetical protein, at 32,484 to 34,073
_4059
EX28DRAFT_4060: EX28DRAFT_4060 - Neutral trehalase, at 34,133 to 35,782
_4060
EX28DRAFT_4061: EX28DRAFT_4061 - NADPH-glutathione reductase (EC 1.8.1.7), at 35,964 to 37,316
_4061
Position (kb) 34
35
36 Strain fitness (log2 ratio) -2
-1
0
1
2 at 33.264 kb on + strand, within EX28DRAFT_4059 at 33.264 kb on + strand, within EX28DRAFT_4059 at 33.264 kb on + strand, within EX28DRAFT_4059 at 33.265 kb on - strand, within EX28DRAFT_4059 at 33.265 kb on - strand, within EX28DRAFT_4059 at 33.347 kb on - strand, within EX28DRAFT_4059 at 33.347 kb on - strand, within EX28DRAFT_4059 at 33.924 kb on + strand at 33.925 kb on - strand at 34.056 kb on + strand at 34.146 kb on + strand at 34.146 kb on + strand at 34.147 kb on - strand at 34.147 kb on - strand at 34.251 kb on + strand at 34.252 kb on - strand at 34.252 kb on - strand at 34.252 kb on - strand at 34.298 kb on - strand, within EX28DRAFT_4060 at 34.515 kb on + strand, within EX28DRAFT_4060 at 34.515 kb on + strand, within EX28DRAFT_4060 at 34.745 kb on - strand, within EX28DRAFT_4060 at 35.130 kb on + strand, within EX28DRAFT_4060 at 35.131 kb on - strand, within EX28DRAFT_4060 at 35.133 kb on + strand, within EX28DRAFT_4060 at 35.133 kb on + strand, within EX28DRAFT_4060 at 35.134 kb on - strand, within EX28DRAFT_4060 at 35.134 kb on - strand, within EX28DRAFT_4060 at 35.134 kb on - strand, within EX28DRAFT_4060 at 35.134 kb on - strand, within EX28DRAFT_4060 at 35.156 kb on - strand, within EX28DRAFT_4060 at 35.156 kb on - strand, within EX28DRAFT_4060 at 35.164 kb on - strand, within EX28DRAFT_4060 at 35.250 kb on + strand, within EX28DRAFT_4060 at 35.250 kb on + strand, within EX28DRAFT_4060 at 35.251 kb on - strand, within EX28DRAFT_4060 at 35.266 kb on - strand, within EX28DRAFT_4060 at 35.266 kb on - strand, within EX28DRAFT_4060 at 35.298 kb on + strand, within EX28DRAFT_4060 at 35.299 kb on - strand, within EX28DRAFT_4060 at 35.299 kb on - strand, within EX28DRAFT_4060 at 35.299 kb on - strand, within EX28DRAFT_4060 at 35.335 kb on + strand, within EX28DRAFT_4060 at 35.336 kb on - strand, within EX28DRAFT_4060 at 35.336 kb on - strand, within EX28DRAFT_4060 at 35.415 kb on + strand, within EX28DRAFT_4060 at 35.415 kb on + strand, within EX28DRAFT_4060 at 35.415 kb on + strand, within EX28DRAFT_4060 at 35.416 kb on - strand, within EX28DRAFT_4060 at 35.416 kb on - strand, within EX28DRAFT_4060 at 35.427 kb on + strand, within EX28DRAFT_4060 at 35.557 kb on + strand, within EX28DRAFT_4060 at 35.718 kb on + strand at 35.766 kb on - strand at 35.837 kb on - strand at 35.837 kb on - strand at 35.839 kb on - strand at 35.844 kb on + strand at 35.844 kb on + strand at 35.875 kb on - strand at 35.921 kb on + strand at 35.922 kb on - strand at 36.421 kb on + strand, within EX28DRAFT_4061 at 36.466 kb on + strand, within EX28DRAFT_4061 at 36.722 kb on + strand, within EX28DRAFT_4061
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 33,264 + EX28DRAFT_4059 0.49 +0.0 33,264 + EX28DRAFT_4059 0.49 -0.6 33,264 + EX28DRAFT_4059 0.49 +0.4 33,265 - EX28DRAFT_4059 0.49 -0.2 33,265 - EX28DRAFT_4059 0.49 +0.9 33,347 - EX28DRAFT_4059 0.54 +0.1 33,347 - EX28DRAFT_4059 0.54 +0.3 33,924 + -0.3 33,925 - -1.3 34,056 + +0.2 34,146 + +0.1 34,146 + +1.3 34,147 - -0.4 34,147 - +0.3 34,251 + +0.2 34,252 - +0.1 34,252 - -0.3 34,252 - -0.2 34,298 - EX28DRAFT_4060 0.10 +1.9 34,515 + EX28DRAFT_4060 0.23 -0.5 34,515 + EX28DRAFT_4060 0.23 +0.1 34,745 - EX28DRAFT_4060 0.37 -0.8 35,130 + EX28DRAFT_4060 0.60 +0.2 35,131 - EX28DRAFT_4060 0.60 -1.1 35,133 + EX28DRAFT_4060 0.61 -0.8 35,133 + EX28DRAFT_4060 0.61 +0.2 35,134 - EX28DRAFT_4060 0.61 -0.3 35,134 - EX28DRAFT_4060 0.61 +0.1 35,134 - EX28DRAFT_4060 0.61 -1.6 35,134 - EX28DRAFT_4060 0.61 +0.3 35,156 - EX28DRAFT_4060 0.62 -0.8 35,156 - EX28DRAFT_4060 0.62 -0.6 35,164 - EX28DRAFT_4060 0.62 -0.2 35,250 + EX28DRAFT_4060 0.68 -0.1 35,250 + EX28DRAFT_4060 0.68 -0.1 35,251 - EX28DRAFT_4060 0.68 +0.0 35,266 - EX28DRAFT_4060 0.69 +0.7 35,266 - EX28DRAFT_4060 0.69 +0.8 35,298 + EX28DRAFT_4060 0.71 -0.3 35,299 - EX28DRAFT_4060 0.71 -0.3 35,299 - EX28DRAFT_4060 0.71 -0.2 35,299 - EX28DRAFT_4060 0.71 -2.0 35,335 + EX28DRAFT_4060 0.73 -1.4 35,336 - EX28DRAFT_4060 0.73 +1.7 35,336 - EX28DRAFT_4060 0.73 +0.5 35,415 + EX28DRAFT_4060 0.78 +0.1 35,415 + EX28DRAFT_4060 0.78 -0.2 35,415 + EX28DRAFT_4060 0.78 +1.2 35,416 - EX28DRAFT_4060 0.78 +0.1 35,416 - EX28DRAFT_4060 0.78 -1.1 35,427 + EX28DRAFT_4060 0.78 -0.2 35,557 + EX28DRAFT_4060 0.86 +0.1 35,718 + -1.7 35,766 - +0.2 35,837 - +0.1 35,837 - -0.5 35,839 - -0.6 35,844 + +0.3 35,844 + -0.1 35,875 - -1.0 35,921 + -0.2 35,922 - +0.4 36,421 + EX28DRAFT_4061 0.34 +1.6 36,466 + EX28DRAFT_4061 0.37 -1.4 36,722 + EX28DRAFT_4061 0.56 +0.7
Or see this region's nucleotide sequence