Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4044 and EX28DRAFT_4045 are separated by 46 nucleotides EX28DRAFT_4045 and EX28DRAFT_4046 are separated by 6 nucleotides
EX28DRAFT_4044: EX28DRAFT_4044 - cellulose synthase catalytic subunit (UDP-forming), at 8,009 to 10,624
_4044
EX28DRAFT_4045: EX28DRAFT_4045 - Bacterial cellulose synthase subunit, at 10,671 to 13,055
_4045
EX28DRAFT_4046: EX28DRAFT_4046 - Endoglucanase Y, at 13,062 to 14,168
_4046
Position (kb) 10
11
12
13
14 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 9.754 kb on + strand, within EX28DRAFT_4044 at 9.754 kb on + strand, within EX28DRAFT_4044 at 9.754 kb on + strand, within EX28DRAFT_4044 at 9.755 kb on - strand, within EX28DRAFT_4044 at 9.758 kb on + strand, within EX28DRAFT_4044 at 9.806 kb on + strand, within EX28DRAFT_4044 at 9.806 kb on + strand, within EX28DRAFT_4044 at 9.897 kb on - strand, within EX28DRAFT_4044 at 9.923 kb on + strand, within EX28DRAFT_4044 at 9.925 kb on + strand, within EX28DRAFT_4044 at 9.925 kb on + strand, within EX28DRAFT_4044 at 9.925 kb on + strand, within EX28DRAFT_4044 at 9.926 kb on - strand, within EX28DRAFT_4044 at 9.926 kb on - strand, within EX28DRAFT_4044 at 9.926 kb on - strand, within EX28DRAFT_4044 at 9.947 kb on - strand, within EX28DRAFT_4044 at 9.978 kb on - strand, within EX28DRAFT_4044 at 10.037 kb on + strand, within EX28DRAFT_4044 at 10.038 kb on - strand, within EX28DRAFT_4044 at 10.038 kb on - strand, within EX28DRAFT_4044 at 10.085 kb on - strand, within EX28DRAFT_4044 at 10.166 kb on - strand, within EX28DRAFT_4044 at 10.274 kb on + strand, within EX28DRAFT_4044 at 10.274 kb on + strand, within EX28DRAFT_4044 at 10.275 kb on - strand, within EX28DRAFT_4044 at 10.275 kb on - strand, within EX28DRAFT_4044 at 10.275 kb on - strand, within EX28DRAFT_4044 at 10.354 kb on + strand, within EX28DRAFT_4044 at 10.372 kb on + strand at 10.372 kb on + strand at 10.426 kb on + strand at 10.532 kb on - strand at 10.808 kb on + strand at 10.976 kb on + strand, within EX28DRAFT_4045 at 11.068 kb on - strand, within EX28DRAFT_4045 at 11.140 kb on + strand, within EX28DRAFT_4045 at 11.140 kb on + strand, within EX28DRAFT_4045 at 11.140 kb on + strand, within EX28DRAFT_4045 at 11.140 kb on + strand, within EX28DRAFT_4045 at 11.140 kb on + strand, within EX28DRAFT_4045 at 11.328 kb on + strand, within EX28DRAFT_4045 at 11.329 kb on - strand, within EX28DRAFT_4045 at 11.523 kb on + strand, within EX28DRAFT_4045 at 11.523 kb on + strand, within EX28DRAFT_4045 at 11.524 kb on - strand, within EX28DRAFT_4045 at 11.524 kb on - strand, within EX28DRAFT_4045 at 11.629 kb on + strand, within EX28DRAFT_4045 at 11.630 kb on - strand, within EX28DRAFT_4045 at 11.790 kb on + strand, within EX28DRAFT_4045 at 11.791 kb on - strand, within EX28DRAFT_4045 at 11.851 kb on - strand, within EX28DRAFT_4045 at 11.925 kb on + strand, within EX28DRAFT_4045 at 11.926 kb on - strand, within EX28DRAFT_4045 at 11.936 kb on + strand, within EX28DRAFT_4045 at 11.952 kb on - strand, within EX28DRAFT_4045 at 11.965 kb on - strand, within EX28DRAFT_4045 at 11.970 kb on + strand, within EX28DRAFT_4045 at 12.066 kb on - strand, within EX28DRAFT_4045 at 12.154 kb on + strand, within EX28DRAFT_4045 at 12.180 kb on + strand, within EX28DRAFT_4045 at 12.180 kb on + strand, within EX28DRAFT_4045 at 12.180 kb on + strand, within EX28DRAFT_4045 at 12.285 kb on + strand, within EX28DRAFT_4045 at 12.285 kb on + strand, within EX28DRAFT_4045 at 12.288 kb on + strand, within EX28DRAFT_4045 at 12.288 kb on + strand, within EX28DRAFT_4045 at 12.289 kb on - strand, within EX28DRAFT_4045 at 12.289 kb on - strand, within EX28DRAFT_4045 at 12.639 kb on - strand, within EX28DRAFT_4045 at 12.729 kb on + strand, within EX28DRAFT_4045 at 12.729 kb on + strand, within EX28DRAFT_4045 at 12.729 kb on + strand, within EX28DRAFT_4045 at 12.891 kb on + strand at 12.892 kb on - strand at 12.892 kb on - strand at 12.892 kb on - strand at 12.895 kb on - strand at 12.895 kb on - strand at 12.895 kb on - strand at 12.899 kb on - strand at 12.899 kb on - strand at 12.899 kb on - strand at 12.899 kb on - strand at 13.020 kb on - strand at 13.155 kb on - strand at 13.165 kb on - strand at 13.214 kb on + strand, within EX28DRAFT_4046 at 13.237 kb on - strand, within EX28DRAFT_4046 at 13.471 kb on - strand, within EX28DRAFT_4046 at 13.473 kb on - strand, within EX28DRAFT_4046 at 13.473 kb on - strand, within EX28DRAFT_4046 at 13.473 kb on - strand, within EX28DRAFT_4046 at 13.605 kb on + strand, within EX28DRAFT_4046 at 13.605 kb on + strand, within EX28DRAFT_4046 at 13.605 kb on + strand, within EX28DRAFT_4046 at 13.629 kb on + strand, within EX28DRAFT_4046 at 13.629 kb on + strand, within EX28DRAFT_4046 at 13.757 kb on - strand, within EX28DRAFT_4046 at 13.767 kb on - strand, within EX28DRAFT_4046 at 13.804 kb on - strand, within EX28DRAFT_4046 at 13.985 kb on - strand, within EX28DRAFT_4046 at 14.045 kb on + strand, within EX28DRAFT_4046 at 14.045 kb on + strand, within EX28DRAFT_4046 at 14.045 kb on + strand, within EX28DRAFT_4046 at 14.046 kb on - strand, within EX28DRAFT_4046 at 14.046 kb on - strand, within EX28DRAFT_4046 at 14.046 kb on - strand, within EX28DRAFT_4046 at 14.053 kb on - strand, within EX28DRAFT_4046 at 14.053 kb on - strand, within EX28DRAFT_4046 at 14.055 kb on + strand, within EX28DRAFT_4046 at 14.055 kb on + strand, within EX28DRAFT_4046 at 14.055 kb on + strand, within EX28DRAFT_4046
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 9,754 + EX28DRAFT_4044 0.67 -0.3 9,754 + EX28DRAFT_4044 0.67 +0.9 9,754 + EX28DRAFT_4044 0.67 +0.5 9,755 - EX28DRAFT_4044 0.67 +0.7 9,758 + EX28DRAFT_4044 0.67 -0.1 9,806 + EX28DRAFT_4044 0.69 +0.2 9,806 + EX28DRAFT_4044 0.69 +0.4 9,897 - EX28DRAFT_4044 0.72 +1.8 9,923 + EX28DRAFT_4044 0.73 +0.9 9,925 + EX28DRAFT_4044 0.73 +0.3 9,925 + EX28DRAFT_4044 0.73 +1.0 9,925 + EX28DRAFT_4044 0.73 +0.3 9,926 - EX28DRAFT_4044 0.73 -0.8 9,926 - EX28DRAFT_4044 0.73 +0.6 9,926 - EX28DRAFT_4044 0.73 +0.1 9,947 - EX28DRAFT_4044 0.74 -0.1 9,978 - EX28DRAFT_4044 0.75 +0.1 10,037 + EX28DRAFT_4044 0.78 +0.1 10,038 - EX28DRAFT_4044 0.78 +0.2 10,038 - EX28DRAFT_4044 0.78 +0.3 10,085 - EX28DRAFT_4044 0.79 +0.2 10,166 - EX28DRAFT_4044 0.82 +0.1 10,274 + EX28DRAFT_4044 0.87 +0.3 10,274 + EX28DRAFT_4044 0.87 +0.3 10,275 - EX28DRAFT_4044 0.87 +0.3 10,275 - EX28DRAFT_4044 0.87 +0.7 10,275 - EX28DRAFT_4044 0.87 +0.9 10,354 + EX28DRAFT_4044 0.90 +0.8 10,372 + +0.2 10,372 + -1.9 10,426 + -0.0 10,532 - +0.5 10,808 + -0.7 10,976 + EX28DRAFT_4045 0.13 +0.5 11,068 - EX28DRAFT_4045 0.17 +0.5 11,140 + EX28DRAFT_4045 0.20 +1.0 11,140 + EX28DRAFT_4045 0.20 +0.4 11,140 + EX28DRAFT_4045 0.20 +3.4 11,140 + EX28DRAFT_4045 0.20 +0.2 11,140 + EX28DRAFT_4045 0.20 +0.5 11,328 + EX28DRAFT_4045 0.28 -1.4 11,329 - EX28DRAFT_4045 0.28 +0.6 11,523 + EX28DRAFT_4045 0.36 +1.3 11,523 + EX28DRAFT_4045 0.36 +0.8 11,524 - EX28DRAFT_4045 0.36 +0.4 11,524 - EX28DRAFT_4045 0.36 +1.0 11,629 + EX28DRAFT_4045 0.40 +0.4 11,630 - EX28DRAFT_4045 0.40 +0.7 11,790 + EX28DRAFT_4045 0.47 +0.2 11,791 - EX28DRAFT_4045 0.47 +0.6 11,851 - EX28DRAFT_4045 0.49 -0.5 11,925 + EX28DRAFT_4045 0.53 +1.4 11,926 - EX28DRAFT_4045 0.53 -0.3 11,936 + EX28DRAFT_4045 0.53 +0.0 11,952 - EX28DRAFT_4045 0.54 +0.5 11,965 - EX28DRAFT_4045 0.54 +0.5 11,970 + EX28DRAFT_4045 0.54 +1.3 12,066 - EX28DRAFT_4045 0.58 -1.1 12,154 + EX28DRAFT_4045 0.62 +0.8 12,180 + EX28DRAFT_4045 0.63 +0.6 12,180 + EX28DRAFT_4045 0.63 +0.2 12,180 + EX28DRAFT_4045 0.63 +0.9 12,285 + EX28DRAFT_4045 0.68 +1.5 12,285 + EX28DRAFT_4045 0.68 -2.0 12,288 + EX28DRAFT_4045 0.68 +0.4 12,288 + EX28DRAFT_4045 0.68 -1.1 12,289 - EX28DRAFT_4045 0.68 +0.6 12,289 - EX28DRAFT_4045 0.68 -0.4 12,639 - EX28DRAFT_4045 0.83 -0.4 12,729 + EX28DRAFT_4045 0.86 -0.1 12,729 + EX28DRAFT_4045 0.86 +0.1 12,729 + EX28DRAFT_4045 0.86 +0.7 12,891 + +0.2 12,892 - +0.4 12,892 - +1.5 12,892 - +0.9 12,895 - +0.1 12,895 - +0.5 12,895 - +0.2 12,899 - +0.1 12,899 - +0.3 12,899 - -0.5 12,899 - +0.8 13,020 - -0.9 13,155 - +0.0 13,165 - -1.5 13,214 + EX28DRAFT_4046 0.14 +0.1 13,237 - EX28DRAFT_4046 0.16 -1.6 13,471 - EX28DRAFT_4046 0.37 +0.0 13,473 - EX28DRAFT_4046 0.37 -1.5 13,473 - EX28DRAFT_4046 0.37 -1.4 13,473 - EX28DRAFT_4046 0.37 -0.8 13,605 + EX28DRAFT_4046 0.49 -0.0 13,605 + EX28DRAFT_4046 0.49 -1.5 13,605 + EX28DRAFT_4046 0.49 -0.1 13,629 + EX28DRAFT_4046 0.51 +0.4 13,629 + EX28DRAFT_4046 0.51 -0.9 13,757 - EX28DRAFT_4046 0.63 -1.1 13,767 - EX28DRAFT_4046 0.64 -1.8 13,804 - EX28DRAFT_4046 0.67 +0.5 13,985 - EX28DRAFT_4046 0.83 -1.1 14,045 + EX28DRAFT_4046 0.89 +0.2 14,045 + EX28DRAFT_4046 0.89 -0.2 14,045 + EX28DRAFT_4046 0.89 -0.4 14,046 - EX28DRAFT_4046 0.89 -0.7 14,046 - EX28DRAFT_4046 0.89 -1.6 14,046 - EX28DRAFT_4046 0.89 -0.8 14,053 - EX28DRAFT_4046 0.90 -0.5 14,053 - EX28DRAFT_4046 0.90 -1.3 14,055 + EX28DRAFT_4046 0.90 -0.5 14,055 + EX28DRAFT_4046 0.90 +0.1 14,055 + EX28DRAFT_4046 0.90 +0.1
Or see this region's nucleotide sequence