Strain Fitness in Enterobacter asburiae PDN3 around EX28DRAFT_3902

Experiment: MS_media with m-arsenite 1 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEX28DRAFT_3901 and EX28DRAFT_3902 are separated by 2 nucleotidesEX28DRAFT_3902 and EX28DRAFT_3903 are separated by 225 nucleotides EX28DRAFT_3901: EX28DRAFT_3901 - ATP-dependent DNA helicase RecG (EC 3.6.1.-), at 108,929 to 111,010 _3901 EX28DRAFT_3902: EX28DRAFT_3902 - sodium--glutamate symport carrier (gltS), at 111,013 to 112,215 _3902 EX28DRAFT_3903: EX28DRAFT_3903 - uracil-xanthine permease, at 112,441 to 113,832 _3903 Position (kb) 111 112 113Strain fitness (log2 ratio) -3 -2 -1 0 1at 110.027 kb on - strand, within EX28DRAFT_3901at 110.256 kb on + strand, within EX28DRAFT_3901at 110.257 kb on - strand, within EX28DRAFT_3901at 110.260 kb on + strand, within EX28DRAFT_3901at 110.399 kb on - strand, within EX28DRAFT_3901at 110.399 kb on - strand, within EX28DRAFT_3901at 110.462 kb on - strand, within EX28DRAFT_3901at 111.038 kb on + strandat 111.039 kb on - strandat 111.218 kb on + strand, within EX28DRAFT_3902at 111.583 kb on - strand, within EX28DRAFT_3902at 111.583 kb on - strand, within EX28DRAFT_3902at 111.583 kb on - strand, within EX28DRAFT_3902at 112.026 kb on + strand, within EX28DRAFT_3902at 112.026 kb on + strand, within EX28DRAFT_3902at 112.026 kb on + strand, within EX28DRAFT_3902at 112.027 kb on - strand, within EX28DRAFT_3902at 112.027 kb on - strand, within EX28DRAFT_3902at 112.215 kb on + strandat 112.216 kb on - strandat 112.216 kb on - strandat 112.244 kb on + strandat 112.330 kb on - strandat 112.457 kb on + strandat 112.457 kb on + strandat 112.653 kb on + strand, within EX28DRAFT_3903at 112.701 kb on + strand, within EX28DRAFT_3903at 112.731 kb on - strand, within EX28DRAFT_3903at 112.756 kb on - strand, within EX28DRAFT_3903at 112.756 kb on - strand, within EX28DRAFT_3903at 113.067 kb on + strand, within EX28DRAFT_3903at 113.067 kb on + strand, within EX28DRAFT_3903at 113.068 kb on - strand, within EX28DRAFT_3903

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Per-strain Table

Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM
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110,027 - EX28DRAFT_3901 0.53 -1.0
110,256 + EX28DRAFT_3901 0.64 -3.0
110,257 - EX28DRAFT_3901 0.64 -2.4
110,260 + EX28DRAFT_3901 0.64 +0.8
110,399 - EX28DRAFT_3901 0.71 -2.0
110,399 - EX28DRAFT_3901 0.71 +0.1
110,462 - EX28DRAFT_3901 0.74 -2.1
111,038 + +1.0
111,039 - +0.7
111,218 + EX28DRAFT_3902 0.17 -0.8
111,583 - EX28DRAFT_3902 0.47 +1.6
111,583 - EX28DRAFT_3902 0.47 -0.0
111,583 - EX28DRAFT_3902 0.47 +0.2
112,026 + EX28DRAFT_3902 0.84 -0.9
112,026 + EX28DRAFT_3902 0.84 -0.6
112,026 + EX28DRAFT_3902 0.84 +0.6
112,027 - EX28DRAFT_3902 0.84 -0.6
112,027 - EX28DRAFT_3902 0.84 -1.0
112,215 + -0.8
112,216 - +0.6
112,216 - -1.1
112,244 + +0.2
112,330 - -0.5
112,457 + +0.3
112,457 + +0.1
112,653 + EX28DRAFT_3903 0.15 -0.3
112,701 + EX28DRAFT_3903 0.19 -0.2
112,731 - EX28DRAFT_3903 0.21 +0.7
112,756 - EX28DRAFT_3903 0.23 +0.8
112,756 - EX28DRAFT_3903 0.23 -0.4
113,067 + EX28DRAFT_3903 0.45 -0.7
113,067 + EX28DRAFT_3903 0.45 +0.5
113,068 - EX28DRAFT_3903 0.45 +0.0

Or see this region's nucleotide sequence