Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3859 and EX28DRAFT_3860 overlap by 1 nucleotides EX28DRAFT_3860 and EX28DRAFT_3861 are separated by 32 nucleotides EX28DRAFT_3861 and EX28DRAFT_3862 are separated by 11 nucleotides EX28DRAFT_3862 and EX28DRAFT_3863 are separated by 220 nucleotides
EX28DRAFT_3859: EX28DRAFT_3859 - Glycerol-3-phosphate dehydrogenase, at 69,128 to 70,147
_3859
EX28DRAFT_3860: EX28DRAFT_3860 - protein-export chaperone SecB, at 70,147 to 70,614
_3860
EX28DRAFT_3861: EX28DRAFT_3861 - Glutaredoxin, GrxC family, at 70,647 to 70,898
_3861
EX28DRAFT_3862: EX28DRAFT_3862 - Rhodanese-related sulfurtransferase, at 70,910 to 71,341
_3862
EX28DRAFT_3863: EX28DRAFT_3863 - phosphoglycerate mutase (EC 5.4.2.1), at 71,562 to 73,133
_3863
Position (kb) 70
71
72 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 70.630 kb on - strand at 70.690 kb on + strand, within EX28DRAFT_3861 at 70.691 kb on - strand, within EX28DRAFT_3861 at 70.691 kb on - strand, within EX28DRAFT_3861 at 70.911 kb on + strand at 70.912 kb on - strand at 70.912 kb on - strand at 71.252 kb on - strand, within EX28DRAFT_3862 at 71.370 kb on - strand at 71.390 kb on + strand at 71.391 kb on - strand at 71.392 kb on + strand at 71.393 kb on - strand at 71.393 kb on - strand at 71.393 kb on - strand at 71.413 kb on - strand at 71.433 kb on - strand at 71.433 kb on - strand at 71.614 kb on + strand at 71.652 kb on - strand at 71.813 kb on + strand, within EX28DRAFT_3863 at 71.927 kb on - strand, within EX28DRAFT_3863 at 72.027 kb on + strand, within EX28DRAFT_3863 at 72.027 kb on + strand, within EX28DRAFT_3863 at 72.151 kb on - strand, within EX28DRAFT_3863 at 72.153 kb on + strand, within EX28DRAFT_3863 at 72.153 kb on + strand, within EX28DRAFT_3863 at 72.199 kb on - strand, within EX28DRAFT_3863 at 72.199 kb on - strand, within EX28DRAFT_3863 at 72.267 kb on + strand, within EX28DRAFT_3863 at 72.268 kb on - strand, within EX28DRAFT_3863 at 72.268 kb on - strand, within EX28DRAFT_3863
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 70,630 - +0.7 70,690 + EX28DRAFT_3861 0.17 +1.8 70,691 - EX28DRAFT_3861 0.17 -0.0 70,691 - EX28DRAFT_3861 0.17 -0.5 70,911 + +2.4 70,912 - +0.4 70,912 - -0.6 71,252 - EX28DRAFT_3862 0.79 +0.2 71,370 - -2.1 71,390 + -0.7 71,391 - +0.2 71,392 + +0.3 71,393 - +0.1 71,393 - -0.4 71,393 - +0.7 71,413 - -0.3 71,433 - +0.7 71,433 - +0.2 71,614 + -0.3 71,652 - -0.3 71,813 + EX28DRAFT_3863 0.16 -3.0 71,927 - EX28DRAFT_3863 0.23 +1.1 72,027 + EX28DRAFT_3863 0.30 -0.5 72,027 + EX28DRAFT_3863 0.30 +0.5 72,151 - EX28DRAFT_3863 0.37 -2.9 72,153 + EX28DRAFT_3863 0.38 +1.1 72,153 + EX28DRAFT_3863 0.38 -0.1 72,199 - EX28DRAFT_3863 0.41 +0.3 72,199 - EX28DRAFT_3863 0.41 -0.6 72,267 + EX28DRAFT_3863 0.45 +0.2 72,268 - EX28DRAFT_3863 0.45 -0.6 72,268 - EX28DRAFT_3863 0.45 +0.2
Or see this region's nucleotide sequence