Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3752 and EX28DRAFT_3753 are separated by 111 nucleotides EX28DRAFT_3753 and EX28DRAFT_3754 are separated by 32 nucleotides EX28DRAFT_3754 and EX28DRAFT_3755 are separated by 63 nucleotides
EX28DRAFT_3752: EX28DRAFT_3752 - Protein of unknown function (DUF3461), at 432,391 to 432,777
_3752
EX28DRAFT_3753: EX28DRAFT_3753 - 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, at 432,889 to 433,713
_3753
EX28DRAFT_3754: EX28DRAFT_3754 - UTP--GlnB (protein PII) uridylyltransferase, GlnD, at 433,746 to 436,421
_3754
EX28DRAFT_3755: EX28DRAFT_3755 - methionine aminopeptidase, type I, at 436,485 to 437,279
_3755
Position (kb) 433
434
435
436
437 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 432.748 kb on - strand at 432.773 kb on + strand at 432.849 kb on + strand at 433.745 kb on - strand at 435.782 kb on - strand, within EX28DRAFT_3754 at 436.392 kb on - strand at 436.447 kb on - strand at 437.315 kb on - strand at 437.318 kb on - strand at 437.323 kb on - strand at 437.323 kb on - strand at 437.323 kb on - strand at 437.376 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 432,748 - -0.1 432,773 + -1.1 432,849 + -0.2 433,745 - -0.3 435,782 - EX28DRAFT_3754 0.76 -3.5 436,392 - -0.3 436,447 - -0.4 437,315 - +0.4 437,318 - +0.2 437,323 - -0.3 437,323 - +0.2 437,323 - -0.1 437,376 + +0.3
Or see this region's nucleotide sequence