Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3675 and EX28DRAFT_3676 are separated by 563 nucleotides EX28DRAFT_3676 and EX28DRAFT_3677 are separated by 2 nucleotides EX28DRAFT_3677 and EX28DRAFT_3678 overlap by 4 nucleotides
EX28DRAFT_3675: EX28DRAFT_3675 - transcriptional regulator, LacI family, at 342,964 to 343,971
_3675
EX28DRAFT_3676: EX28DRAFT_3676 - mraZ protein, at 344,535 to 345,029
_3676
EX28DRAFT_3677: EX28DRAFT_3677 - 16S rRNA (cytosine(1402)-N(4))-methyltransferase, at 345,032 to 345,973
_3677
EX28DRAFT_3678: EX28DRAFT_3678 - cell division protein FtsL, at 345,970 to 346,335
_3678
Position (kb) 344
345
346 Strain fitness (log2 ratio) -2
-1
0
1
2 at 343.604 kb on - strand, within EX28DRAFT_3675 at 343.604 kb on - strand, within EX28DRAFT_3675 at 343.609 kb on + strand, within EX28DRAFT_3675 at 343.609 kb on + strand, within EX28DRAFT_3675 at 343.609 kb on + strand, within EX28DRAFT_3675 at 343.617 kb on + strand, within EX28DRAFT_3675 at 343.618 kb on - strand, within EX28DRAFT_3675 at 343.622 kb on - strand, within EX28DRAFT_3675 at 343.622 kb on - strand, within EX28DRAFT_3675 at 343.749 kb on + strand, within EX28DRAFT_3675 at 344.025 kb on - strand at 344.042 kb on + strand at 344.043 kb on - strand at 344.064 kb on + strand at 344.065 kb on - strand at 344.065 kb on - strand at 344.183 kb on - strand at 344.318 kb on - strand at 344.319 kb on + strand at 344.320 kb on - strand at 344.324 kb on - strand at 344.386 kb on + strand at 344.386 kb on + strand at 344.386 kb on + strand at 344.442 kb on - strand at 344.442 kb on - strand at 344.450 kb on - strand at 344.474 kb on + strand at 344.690 kb on + strand, within EX28DRAFT_3676 at 345.027 kb on + strand at 345.031 kb on + strand at 345.284 kb on + strand, within EX28DRAFT_3677
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 343,604 - EX28DRAFT_3675 0.63 -2.3 343,604 - EX28DRAFT_3675 0.63 -0.0 343,609 + EX28DRAFT_3675 0.64 -1.3 343,609 + EX28DRAFT_3675 0.64 -1.8 343,609 + EX28DRAFT_3675 0.64 -0.3 343,617 + EX28DRAFT_3675 0.65 -0.4 343,618 - EX28DRAFT_3675 0.65 -1.2 343,622 - EX28DRAFT_3675 0.65 -1.4 343,622 - EX28DRAFT_3675 0.65 -1.1 343,749 + EX28DRAFT_3675 0.78 -0.5 344,025 - -0.6 344,042 + -0.1 344,043 - -0.0 344,064 + -0.2 344,065 - -0.4 344,065 - +1.9 344,183 - +0.6 344,318 - -0.5 344,319 + -0.4 344,320 - +0.1 344,324 - -0.9 344,386 + +0.0 344,386 + -0.1 344,386 + -1.0 344,442 - +0.2 344,442 - +0.7 344,450 - +0.3 344,474 + +0.2 344,690 + EX28DRAFT_3676 0.31 +0.5 345,027 + +2.1 345,031 + -0.5 345,284 + EX28DRAFT_3677 0.27 +0.8
Or see this region's nucleotide sequence