Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3534 and EX28DRAFT_3535 are separated by 10 nucleotides EX28DRAFT_3535 and EX28DRAFT_3536 are separated by 100 nucleotides
EX28DRAFT_3534: EX28DRAFT_3534 - Putative GTPases (G3E family), at 197,349 to 198,302
_3534
EX28DRAFT_3535: EX28DRAFT_3535 - Uncharacterized small protein, at 198,313 to 198,516
_3535
EX28DRAFT_3536: EX28DRAFT_3536 - Carbon starvation protein, predicted membrane protein, at 198,617 to 200,770
_3536
Position (kb) 198
199 Strain fitness (log2 ratio) -2
-1
0
1 at 197.409 kb on - strand at 197.699 kb on + strand, within EX28DRAFT_3534 at 197.699 kb on + strand, within EX28DRAFT_3534 at 197.700 kb on - strand, within EX28DRAFT_3534 at 197.755 kb on + strand, within EX28DRAFT_3534 at 197.925 kb on + strand, within EX28DRAFT_3534 at 197.926 kb on - strand, within EX28DRAFT_3534 at 197.926 kb on - strand, within EX28DRAFT_3534 at 198.085 kb on - strand, within EX28DRAFT_3534 at 198.386 kb on + strand, within EX28DRAFT_3535 at 198.386 kb on + strand, within EX28DRAFT_3535 at 198.387 kb on - strand, within EX28DRAFT_3535 at 198.387 kb on - strand, within EX28DRAFT_3535 at 198.423 kb on + strand, within EX28DRAFT_3535 at 198.423 kb on + strand, within EX28DRAFT_3535 at 198.423 kb on + strand, within EX28DRAFT_3535 at 198.434 kb on + strand, within EX28DRAFT_3535 at 198.434 kb on + strand, within EX28DRAFT_3535 at 198.434 kb on + strand, within EX28DRAFT_3535 at 198.434 kb on + strand, within EX28DRAFT_3535 at 198.502 kb on + strand at 198.565 kb on - strand at 198.741 kb on + strand at 198.784 kb on - strand at 198.784 kb on - strand at 198.784 kb on - strand at 198.864 kb on + strand, within EX28DRAFT_3536 at 198.984 kb on + strand, within EX28DRAFT_3536 at 198.984 kb on + strand, within EX28DRAFT_3536 at 198.984 kb on + strand, within EX28DRAFT_3536 at 198.985 kb on - strand, within EX28DRAFT_3536 at 198.985 kb on - strand, within EX28DRAFT_3536 at 198.985 kb on - strand, within EX28DRAFT_3536 at 199.430 kb on - strand, within EX28DRAFT_3536
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 197,409 - +1.5 197,699 + EX28DRAFT_3534 0.37 +0.8 197,699 + EX28DRAFT_3534 0.37 -0.7 197,700 - EX28DRAFT_3534 0.37 -0.2 197,755 + EX28DRAFT_3534 0.43 +0.1 197,925 + EX28DRAFT_3534 0.60 +0.6 197,926 - EX28DRAFT_3534 0.60 -0.2 197,926 - EX28DRAFT_3534 0.60 -0.6 198,085 - EX28DRAFT_3534 0.77 +0.3 198,386 + EX28DRAFT_3535 0.36 +0.5 198,386 + EX28DRAFT_3535 0.36 -1.8 198,387 - EX28DRAFT_3535 0.36 +0.8 198,387 - EX28DRAFT_3535 0.36 -1.1 198,423 + EX28DRAFT_3535 0.54 -0.0 198,423 + EX28DRAFT_3535 0.54 +0.9 198,423 + EX28DRAFT_3535 0.54 +0.2 198,434 + EX28DRAFT_3535 0.59 -0.2 198,434 + EX28DRAFT_3535 0.59 -0.7 198,434 + EX28DRAFT_3535 0.59 +0.2 198,434 + EX28DRAFT_3535 0.59 +0.1 198,502 + -0.5 198,565 - +0.0 198,741 + -0.3 198,784 - +0.0 198,784 - +0.2 198,784 - +0.0 198,864 + EX28DRAFT_3536 0.11 -0.0 198,984 + EX28DRAFT_3536 0.17 +0.4 198,984 + EX28DRAFT_3536 0.17 -0.1 198,984 + EX28DRAFT_3536 0.17 +0.0 198,985 - EX28DRAFT_3536 0.17 +0.4 198,985 - EX28DRAFT_3536 0.17 -1.2 198,985 - EX28DRAFT_3536 0.17 +0.1 199,430 - EX28DRAFT_3536 0.38 -0.6
Or see this region's nucleotide sequence