Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3531 and EX28DRAFT_3532 overlap by 1 nucleotides EX28DRAFT_3532 and EX28DRAFT_3533 are separated by 411 nucleotides EX28DRAFT_3533 and EX28DRAFT_3534 are separated by 476 nucleotides
EX28DRAFT_3531: EX28DRAFT_3531 - hypothetical protein, at 194,237 to 194,557
_3531
EX28DRAFT_3532: EX28DRAFT_3532 - YfaZ precursor, at 194,557 to 195,102
_3532
EX28DRAFT_3533: EX28DRAFT_3533 - Uncharacterized protein conserved in bacteria, at 195,514 to 196,872
_3533
EX28DRAFT_3534: EX28DRAFT_3534 - Putative GTPases (G3E family), at 197,349 to 198,302
_3534
Position (kb) 195
196
197 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 194.579 kb on - strand at 194.582 kb on + strand at 194.582 kb on + strand at 194.670 kb on + strand, within EX28DRAFT_3532 at 194.670 kb on + strand, within EX28DRAFT_3532 at 194.709 kb on - strand, within EX28DRAFT_3532 at 194.747 kb on + strand, within EX28DRAFT_3532 at 194.748 kb on - strand, within EX28DRAFT_3532 at 194.748 kb on - strand, within EX28DRAFT_3532 at 194.964 kb on - strand, within EX28DRAFT_3532 at 195.107 kb on + strand at 195.296 kb on - strand at 195.417 kb on + strand at 195.419 kb on + strand at 195.419 kb on + strand at 195.419 kb on + strand at 195.419 kb on + strand at 195.420 kb on - strand at 195.420 kb on - strand at 195.497 kb on - strand at 195.497 kb on - strand at 195.507 kb on + strand at 195.513 kb on + strand at 195.514 kb on - strand at 195.631 kb on + strand at 195.699 kb on + strand, within EX28DRAFT_3533 at 195.794 kb on + strand, within EX28DRAFT_3533 at 195.889 kb on - strand, within EX28DRAFT_3533 at 196.159 kb on - strand, within EX28DRAFT_3533 at 196.218 kb on + strand, within EX28DRAFT_3533 at 196.219 kb on - strand, within EX28DRAFT_3533 at 196.327 kb on + strand, within EX28DRAFT_3533 at 196.327 kb on + strand, within EX28DRAFT_3533 at 196.328 kb on - strand, within EX28DRAFT_3533 at 196.328 kb on - strand, within EX28DRAFT_3533 at 196.354 kb on + strand, within EX28DRAFT_3533 at 196.437 kb on + strand, within EX28DRAFT_3533 at 196.466 kb on - strand, within EX28DRAFT_3533 at 196.466 kb on - strand, within EX28DRAFT_3533 at 196.777 kb on - strand at 196.845 kb on + strand at 196.847 kb on + strand at 196.847 kb on + strand at 196.870 kb on + strand at 196.870 kb on + strand at 196.876 kb on + strand at 196.876 kb on + strand at 196.913 kb on + strand at 196.973 kb on + strand at 196.973 kb on + strand at 196.974 kb on - strand at 196.974 kb on - strand at 196.988 kb on + strand at 197.003 kb on - strand at 197.003 kb on - strand at 197.003 kb on - strand at 197.003 kb on - strand at 197.003 kb on - strand at 197.014 kb on + strand at 197.015 kb on - strand at 197.261 kb on + strand at 197.409 kb on - strand at 197.699 kb on + strand, within EX28DRAFT_3534 at 197.699 kb on + strand, within EX28DRAFT_3534 at 197.700 kb on - strand, within EX28DRAFT_3534 at 197.755 kb on + strand, within EX28DRAFT_3534
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 194,579 - -0.1 194,582 + +0.3 194,582 + -1.2 194,670 + EX28DRAFT_3532 0.21 -0.1 194,670 + EX28DRAFT_3532 0.21 +1.0 194,709 - EX28DRAFT_3532 0.28 +0.5 194,747 + EX28DRAFT_3532 0.35 -0.1 194,748 - EX28DRAFT_3532 0.35 +0.2 194,748 - EX28DRAFT_3532 0.35 -0.6 194,964 - EX28DRAFT_3532 0.75 -0.2 195,107 + -0.8 195,296 - +0.0 195,417 + +0.6 195,419 + +0.4 195,419 + +0.1 195,419 + -0.4 195,419 + +0.1 195,420 - -0.1 195,420 - -0.1 195,497 - +0.0 195,497 - +0.4 195,507 + +0.0 195,513 + -0.2 195,514 - -0.5 195,631 + +0.7 195,699 + EX28DRAFT_3533 0.14 +0.1 195,794 + EX28DRAFT_3533 0.21 +0.2 195,889 - EX28DRAFT_3533 0.28 -0.1 196,159 - EX28DRAFT_3533 0.47 -0.4 196,218 + EX28DRAFT_3533 0.52 +0.3 196,219 - EX28DRAFT_3533 0.52 +0.9 196,327 + EX28DRAFT_3533 0.60 +1.7 196,327 + EX28DRAFT_3533 0.60 -3.9 196,328 - EX28DRAFT_3533 0.60 +0.1 196,328 - EX28DRAFT_3533 0.60 -0.0 196,354 + EX28DRAFT_3533 0.62 +0.3 196,437 + EX28DRAFT_3533 0.68 -0.6 196,466 - EX28DRAFT_3533 0.70 +0.7 196,466 - EX28DRAFT_3533 0.70 +0.8 196,777 - -0.1 196,845 + -0.4 196,847 + -0.0 196,847 + +1.0 196,870 + +1.3 196,870 + +0.3 196,876 + -0.6 196,876 + -0.5 196,913 + -0.4 196,973 + -0.8 196,973 + +0.2 196,974 - +0.7 196,974 - +0.2 196,988 + -0.4 197,003 - +0.4 197,003 - +2.3 197,003 - +0.1 197,003 - +0.7 197,003 - -0.9 197,014 + +0.4 197,015 - -0.0 197,261 + -0.6 197,409 - +1.5 197,699 + EX28DRAFT_3534 0.37 +0.8 197,699 + EX28DRAFT_3534 0.37 -0.7 197,700 - EX28DRAFT_3534 0.37 -0.2 197,755 + EX28DRAFT_3534 0.43 +0.1
Or see this region's nucleotide sequence