Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3390 and EX28DRAFT_3391 are separated by 311 nucleotides EX28DRAFT_3391 and EX28DRAFT_3392 are separated by 96 nucleotides
EX28DRAFT_3390: EX28DRAFT_3390 - FKBP-type peptidyl-prolyl cis-trans isomerases 1, at 57,213 to 57,833
_3390
EX28DRAFT_3391: EX28DRAFT_3391 - Gamma-aminobutyrate permease and related permeases, at 58,145 to 59,554
_3391
EX28DRAFT_3392: EX28DRAFT_3392 - iron-sulfur cluster repair di-iron protein, at 59,651 to 60,313
_3392
Position (kb)
58
59
60 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 57.174 kb on - strand at 57.174 kb on - strand at 57.190 kb on + strand at 57.191 kb on - strand at 57.191 kb on - strand at 57.313 kb on + strand, within EX28DRAFT_3390 at 57.472 kb on - strand, within EX28DRAFT_3390 at 57.591 kb on + strand, within EX28DRAFT_3390 at 57.592 kb on - strand, within EX28DRAFT_3390 at 57.744 kb on - strand, within EX28DRAFT_3390 at 57.831 kb on + strand at 57.883 kb on - strand at 57.891 kb on + strand at 58.012 kb on + strand at 58.020 kb on - strand at 58.045 kb on + strand at 58.111 kb on + strand at 58.111 kb on + strand at 58.150 kb on - strand at 58.150 kb on - strand at 58.225 kb on + strand at 58.322 kb on + strand, within EX28DRAFT_3391 at 58.324 kb on + strand, within EX28DRAFT_3391 at 58.340 kb on - strand, within EX28DRAFT_3391 at 58.735 kb on + strand, within EX28DRAFT_3391 at 58.809 kb on + strand, within EX28DRAFT_3391 at 58.809 kb on + strand, within EX28DRAFT_3391 at 58.892 kb on - strand, within EX28DRAFT_3391 at 58.910 kb on - strand, within EX28DRAFT_3391 at 58.910 kb on - strand, within EX28DRAFT_3391 at 58.922 kb on + strand, within EX28DRAFT_3391 at 58.923 kb on - strand, within EX28DRAFT_3391 at 58.923 kb on - strand, within EX28DRAFT_3391 at 58.923 kb on - strand, within EX28DRAFT_3391 at 58.923 kb on - strand, within EX28DRAFT_3391 at 58.946 kb on - strand, within EX28DRAFT_3391 at 58.946 kb on - strand, within EX28DRAFT_3391 at 59.014 kb on - strand, within EX28DRAFT_3391 at 59.041 kb on + strand, within EX28DRAFT_3391 at 59.041 kb on + strand, within EX28DRAFT_3391 at 59.042 kb on - strand, within EX28DRAFT_3391 at 59.231 kb on + strand, within EX28DRAFT_3391 at 59.232 kb on - strand, within EX28DRAFT_3391 at 59.263 kb on + strand, within EX28DRAFT_3391 at 59.294 kb on - strand, within EX28DRAFT_3391 at 59.294 kb on - strand, within EX28DRAFT_3391 at 59.334 kb on - strand, within EX28DRAFT_3391 at 59.372 kb on + strand, within EX28DRAFT_3391 at 59.372 kb on + strand, within EX28DRAFT_3391 at 59.373 kb on - strand, within EX28DRAFT_3391 at 59.536 kb on + strand at 59.553 kb on - strand at 59.553 kb on - strand at 59.663 kb on + strand at 59.723 kb on - strand, within EX28DRAFT_3392 at 59.742 kb on + strand, within EX28DRAFT_3392 at 59.743 kb on - strand, within EX28DRAFT_3392 at 59.891 kb on + strand, within EX28DRAFT_3392 at 59.892 kb on - strand, within EX28DRAFT_3392 at 59.927 kb on - strand, within EX28DRAFT_3392 at 59.927 kb on - strand, within EX28DRAFT_3392 at 59.961 kb on + strand, within EX28DRAFT_3392 at 60.062 kb on - strand, within EX28DRAFT_3392 at 60.241 kb on - strand, within EX28DRAFT_3392 at 60.241 kb on - strand, within EX28DRAFT_3392 at 60.314 kb on - strand at 60.335 kb on - strand at 60.374 kb on + strand at 60.375 kb on - strand at 60.375 kb on - strand at 60.375 kb on - strand at 60.451 kb on + strand at 60.451 kb on + strand at 60.452 kb on - strand at 60.452 kb on - strand at 60.452 kb on - strand at 60.484 kb on - strand at 60.484 kb on - strand at 60.516 kb on + strand at 60.518 kb on + strand at 60.519 kb on - strand at 60.519 kb on - strand at 60.541 kb on + strand at 60.541 kb on + strand at 60.542 kb on - strand at 60.542 kb on - strand at 60.542 kb on - strand at 60.542 kb on - strand at 60.543 kb on + strand at 60.543 kb on + strand at 60.544 kb on - strand at 60.544 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 57,174 - +0.2 57,174 - +0.1 57,190 + +0.1 57,191 - -0.3 57,191 - +0.6 57,313 + EX28DRAFT_3390 0.16 +1.3 57,472 - EX28DRAFT_3390 0.42 +0.6 57,591 + EX28DRAFT_3390 0.61 +0.7 57,592 - EX28DRAFT_3390 0.61 +0.0 57,744 - EX28DRAFT_3390 0.86 +0.3 57,831 + -0.3 57,883 - +0.6 57,891 + -0.9 58,012 + -2.2 58,020 - +0.1 58,045 + -2.2 58,111 + -2.4 58,111 + -1.9 58,150 - +1.6 58,150 - +1.1 58,225 + +1.0 58,322 + EX28DRAFT_3391 0.13 -0.0 58,324 + EX28DRAFT_3391 0.13 +0.6 58,340 - EX28DRAFT_3391 0.14 +1.2 58,735 + EX28DRAFT_3391 0.42 +1.3 58,809 + EX28DRAFT_3391 0.47 +0.7 58,809 + EX28DRAFT_3391 0.47 +1.2 58,892 - EX28DRAFT_3391 0.53 +2.1 58,910 - EX28DRAFT_3391 0.54 +0.1 58,910 - EX28DRAFT_3391 0.54 +1.1 58,922 + EX28DRAFT_3391 0.55 +1.3 58,923 - EX28DRAFT_3391 0.55 +0.6 58,923 - EX28DRAFT_3391 0.55 -0.1 58,923 - EX28DRAFT_3391 0.55 +1.0 58,923 - EX28DRAFT_3391 0.55 +1.0 58,946 - EX28DRAFT_3391 0.57 +0.5 58,946 - EX28DRAFT_3391 0.57 +1.2 59,014 - EX28DRAFT_3391 0.62 +1.0 59,041 + EX28DRAFT_3391 0.64 +1.0 59,041 + EX28DRAFT_3391 0.64 +0.5 59,042 - EX28DRAFT_3391 0.64 -1.8 59,231 + EX28DRAFT_3391 0.77 +1.7 59,232 - EX28DRAFT_3391 0.77 +0.7 59,263 + EX28DRAFT_3391 0.79 +3.5 59,294 - EX28DRAFT_3391 0.81 +1.0 59,294 - EX28DRAFT_3391 0.81 +2.1 59,334 - EX28DRAFT_3391 0.84 +1.3 59,372 + EX28DRAFT_3391 0.87 +1.0 59,372 + EX28DRAFT_3391 0.87 +1.2 59,373 - EX28DRAFT_3391 0.87 +0.9 59,536 + +1.7 59,553 - +0.4 59,553 - -0.2 59,663 + +0.9 59,723 - EX28DRAFT_3392 0.11 +0.5 59,742 + EX28DRAFT_3392 0.14 -2.3 59,743 - EX28DRAFT_3392 0.14 +0.9 59,891 + EX28DRAFT_3392 0.36 -0.5 59,892 - EX28DRAFT_3392 0.36 -0.4 59,927 - EX28DRAFT_3392 0.42 +0.1 59,927 - EX28DRAFT_3392 0.42 +0.5 59,961 + EX28DRAFT_3392 0.47 -0.4 60,062 - EX28DRAFT_3392 0.62 +0.7 60,241 - EX28DRAFT_3392 0.89 +0.0 60,241 - EX28DRAFT_3392 0.89 -0.4 60,314 - -0.8 60,335 - -0.2 60,374 + +0.6 60,375 - -0.7 60,375 - -0.6 60,375 - +0.9 60,451 + -3.6 60,451 + +0.9 60,452 - +0.3 60,452 - +0.2 60,452 - +0.7 60,484 - +0.6 60,484 - +0.7 60,516 + -1.1 60,518 + -0.3 60,519 - +0.7 60,519 - +0.3 60,541 + -1.0 60,541 + -0.0 60,542 - -0.3 60,542 - +1.3 60,542 - +1.5 60,542 - -0.0 60,543 + -0.0 60,543 + +0.2 60,544 - -0.1 60,544 - +0.3
Or see this region's nucleotide sequence