Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3386 and EX28DRAFT_3387 are separated by 4 nucleotides EX28DRAFT_3387 and EX28DRAFT_3388 are separated by 41 nucleotides EX28DRAFT_3388 and EX28DRAFT_3389 are separated by 67 nucleotides EX28DRAFT_3389 and EX28DRAFT_3390 are separated by 233 nucleotides
EX28DRAFT_3386: EX28DRAFT_3386 - restart primosome assembly protein PriB, at 55,230 to 55,544
_3386
EX28DRAFT_3387: EX28DRAFT_3387 - SSU ribosomal protein S18P, at 55,549 to 55,776
_3387
EX28DRAFT_3388: EX28DRAFT_3388 - ribosomal protein L9, at 55,818 to 56,267
_3388
EX28DRAFT_3389: EX28DRAFT_3389 - Cell envelope opacity-associated protein A, at 56,335 to 56,979
_3389
EX28DRAFT_3390: EX28DRAFT_3390 - FKBP-type peptidyl-prolyl cis-trans isomerases 1, at 57,213 to 57,833
_3390
Position (kb) 56
57 Strain fitness (log2 ratio) -2
-1
0
1 at 56.321 kb on + strand at 56.513 kb on + strand, within EX28DRAFT_3389 at 56.952 kb on + strand at 56.953 kb on - strand at 57.027 kb on - strand at 57.035 kb on - strand at 57.096 kb on + strand at 57.103 kb on - strand at 57.103 kb on - strand at 57.174 kb on - strand at 57.174 kb on - strand at 57.190 kb on + strand at 57.191 kb on - strand at 57.191 kb on - strand at 57.313 kb on + strand, within EX28DRAFT_3390 at 57.472 kb on - strand, within EX28DRAFT_3390 at 57.591 kb on + strand, within EX28DRAFT_3390 at 57.592 kb on - strand, within EX28DRAFT_3390 at 57.744 kb on - strand, within EX28DRAFT_3390 at 57.831 kb on + strand at 57.883 kb on - strand at 57.891 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 56,321 + -0.1 56,513 + EX28DRAFT_3389 0.28 +0.6 56,952 + -0.7 56,953 - -0.4 57,027 - -0.9 57,035 - -0.4 57,096 + -2.2 57,103 - -1.0 57,103 - -0.3 57,174 - +0.2 57,174 - +0.1 57,190 + +0.1 57,191 - -0.3 57,191 - +0.6 57,313 + EX28DRAFT_3390 0.16 +1.3 57,472 - EX28DRAFT_3390 0.42 +0.6 57,591 + EX28DRAFT_3390 0.61 +0.7 57,592 - EX28DRAFT_3390 0.61 +0.0 57,744 - EX28DRAFT_3390 0.86 +0.3 57,831 + -0.3 57,883 - +0.6 57,891 + -0.9
Or see this region's nucleotide sequence