Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3350 and EX28DRAFT_3351 are separated by 132 nucleotides EX28DRAFT_3351 and EX28DRAFT_3352 are separated by 29 nucleotides EX28DRAFT_3352 and EX28DRAFT_3353 are separated by 10 nucleotides EX28DRAFT_3353 and EX28DRAFT_3354 are separated by 10 nucleotides
EX28DRAFT_3350: EX28DRAFT_3350 - Beta-lactamase class C and other penicillin binding proteins, at 16,658 to 17,800
_3350
EX28DRAFT_3351: EX28DRAFT_3351 - Transcriptional regulator, at 17,933 to 18,808
_3351
EX28DRAFT_3352: EX28DRAFT_3352 - succinate dehydrogenase subunit D (EC 1.3.5.1), at 18,838 to 19,197
_3352
EX28DRAFT_3353: EX28DRAFT_3353 - Fumarate reductase subunit C, at 19,208 to 19,603
_3353
EX28DRAFT_3354: EX28DRAFT_3354 - succinate dehydrogenase and fumarate reductase iron-sulfur protein, at 19,614 to 20,348
_3354
Position (kb) 17
18
19 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 16.944 kb on + strand, within EX28DRAFT_3350 at 16.945 kb on - strand, within EX28DRAFT_3350 at 16.945 kb on - strand, within EX28DRAFT_3350 at 17.080 kb on - strand, within EX28DRAFT_3350 at 17.145 kb on + strand, within EX28DRAFT_3350 at 17.146 kb on - strand, within EX28DRAFT_3350 at 17.182 kb on + strand, within EX28DRAFT_3350 at 17.182 kb on + strand, within EX28DRAFT_3350 at 17.182 kb on + strand, within EX28DRAFT_3350 at 17.183 kb on - strand, within EX28DRAFT_3350 at 17.183 kb on - strand, within EX28DRAFT_3350 at 17.183 kb on - strand, within EX28DRAFT_3350 at 17.233 kb on - strand, within EX28DRAFT_3350 at 17.233 kb on - strand, within EX28DRAFT_3350 at 17.233 kb on - strand, within EX28DRAFT_3350 at 17.233 kb on - strand, within EX28DRAFT_3350 at 17.337 kb on + strand, within EX28DRAFT_3350 at 17.406 kb on + strand, within EX28DRAFT_3350 at 17.406 kb on + strand, within EX28DRAFT_3350 at 17.406 kb on + strand, within EX28DRAFT_3350 at 17.406 kb on + strand, within EX28DRAFT_3350 at 17.406 kb on + strand, within EX28DRAFT_3350 at 17.407 kb on - strand, within EX28DRAFT_3350 at 17.493 kb on - strand, within EX28DRAFT_3350 at 17.542 kb on + strand, within EX28DRAFT_3350 at 17.543 kb on - strand, within EX28DRAFT_3350 at 17.548 kb on + strand, within EX28DRAFT_3350 at 17.617 kb on + strand, within EX28DRAFT_3350 at 17.618 kb on - strand, within EX28DRAFT_3350 at 17.618 kb on - strand, within EX28DRAFT_3350 at 17.622 kb on + strand, within EX28DRAFT_3350 at 17.623 kb on - strand, within EX28DRAFT_3350 at 17.640 kb on + strand, within EX28DRAFT_3350 at 17.641 kb on - strand, within EX28DRAFT_3350 at 17.748 kb on - strand at 17.792 kb on - strand at 17.792 kb on - strand at 17.806 kb on - strand at 17.814 kb on + strand at 17.815 kb on - strand at 17.817 kb on + strand at 17.818 kb on - strand at 17.857 kb on - strand at 17.945 kb on + strand at 17.946 kb on - strand at 17.946 kb on - strand at 17.946 kb on - strand at 17.956 kb on + strand at 17.956 kb on + strand at 17.956 kb on + strand at 17.957 kb on - strand at 17.957 kb on - strand at 17.957 kb on - strand at 17.957 kb on - strand at 17.957 kb on - strand at 18.002 kb on - strand at 18.076 kb on + strand, within EX28DRAFT_3351 at 18.076 kb on + strand, within EX28DRAFT_3351 at 18.077 kb on - strand, within EX28DRAFT_3351 at 18.077 kb on - strand, within EX28DRAFT_3351 at 18.220 kb on + strand, within EX28DRAFT_3351 at 18.291 kb on - strand, within EX28DRAFT_3351 at 18.298 kb on + strand, within EX28DRAFT_3351 at 18.298 kb on + strand, within EX28DRAFT_3351 at 18.322 kb on + strand, within EX28DRAFT_3351 at 18.323 kb on - strand, within EX28DRAFT_3351 at 18.359 kb on + strand, within EX28DRAFT_3351 at 18.360 kb on - strand, within EX28DRAFT_3351 at 18.439 kb on + strand, within EX28DRAFT_3351 at 18.450 kb on + strand, within EX28DRAFT_3351 at 18.490 kb on + strand, within EX28DRAFT_3351 at 18.507 kb on - strand, within EX28DRAFT_3351 at 18.507 kb on - strand, within EX28DRAFT_3351 at 18.667 kb on - strand, within EX28DRAFT_3351 at 18.807 kb on - strand at 18.893 kb on + strand, within EX28DRAFT_3352 at 18.893 kb on + strand, within EX28DRAFT_3352 at 18.893 kb on + strand, within EX28DRAFT_3352 at 18.894 kb on - strand, within EX28DRAFT_3352 at 19.083 kb on + strand, within EX28DRAFT_3352 at 19.274 kb on - strand, within EX28DRAFT_3353 at 19.471 kb on - strand, within EX28DRAFT_3353 at 19.528 kb on - strand, within EX28DRAFT_3353 at 19.581 kb on + strand at 19.581 kb on + strand at 19.582 kb on - strand at 19.582 kb on - strand at 19.582 kb on - strand at 19.582 kb on - strand at 19.615 kb on + strand at 19.772 kb on + strand, within EX28DRAFT_3354 at 19.772 kb on + strand, within EX28DRAFT_3354 at 19.772 kb on + strand, within EX28DRAFT_3354 at 19.773 kb on - strand, within EX28DRAFT_3354
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 16,944 + EX28DRAFT_3350 0.25 -1.1 16,945 - EX28DRAFT_3350 0.25 +0.0 16,945 - EX28DRAFT_3350 0.25 -0.5 17,080 - EX28DRAFT_3350 0.37 -0.8 17,145 + EX28DRAFT_3350 0.43 -0.0 17,146 - EX28DRAFT_3350 0.43 +0.1 17,182 + EX28DRAFT_3350 0.46 +0.1 17,182 + EX28DRAFT_3350 0.46 +0.2 17,182 + EX28DRAFT_3350 0.46 +0.4 17,183 - EX28DRAFT_3350 0.46 -1.5 17,183 - EX28DRAFT_3350 0.46 +0.6 17,183 - EX28DRAFT_3350 0.46 -0.4 17,233 - EX28DRAFT_3350 0.50 -0.3 17,233 - EX28DRAFT_3350 0.50 +0.6 17,233 - EX28DRAFT_3350 0.50 +0.7 17,233 - EX28DRAFT_3350 0.50 +0.0 17,337 + EX28DRAFT_3350 0.59 -0.4 17,406 + EX28DRAFT_3350 0.65 +0.4 17,406 + EX28DRAFT_3350 0.65 -1.3 17,406 + EX28DRAFT_3350 0.65 +0.0 17,406 + EX28DRAFT_3350 0.65 +0.4 17,406 + EX28DRAFT_3350 0.65 -0.1 17,407 - EX28DRAFT_3350 0.66 -0.2 17,493 - EX28DRAFT_3350 0.73 +0.1 17,542 + EX28DRAFT_3350 0.77 -4.5 17,543 - EX28DRAFT_3350 0.77 -0.0 17,548 + EX28DRAFT_3350 0.78 -0.4 17,617 + EX28DRAFT_3350 0.84 +0.1 17,618 - EX28DRAFT_3350 0.84 -1.4 17,618 - EX28DRAFT_3350 0.84 +1.2 17,622 + EX28DRAFT_3350 0.84 -0.9 17,623 - EX28DRAFT_3350 0.84 -1.2 17,640 + EX28DRAFT_3350 0.86 -0.9 17,641 - EX28DRAFT_3350 0.86 -1.0 17,748 - +0.1 17,792 - +0.7 17,792 - -1.1 17,806 - +0.1 17,814 + +0.2 17,815 - +0.5 17,817 + +0.3 17,818 - +0.4 17,857 - -0.1 17,945 + -0.3 17,946 - -0.3 17,946 - +0.6 17,946 - -0.6 17,956 + +1.2 17,956 + -0.6 17,956 + -0.9 17,957 - -0.2 17,957 - +0.3 17,957 - -0.1 17,957 - -0.1 17,957 - -0.9 18,002 - -0.2 18,076 + EX28DRAFT_3351 0.16 -0.2 18,076 + EX28DRAFT_3351 0.16 -0.1 18,077 - EX28DRAFT_3351 0.16 -1.2 18,077 - EX28DRAFT_3351 0.16 +0.1 18,220 + EX28DRAFT_3351 0.33 -0.4 18,291 - EX28DRAFT_3351 0.41 -0.2 18,298 + EX28DRAFT_3351 0.42 +0.3 18,298 + EX28DRAFT_3351 0.42 -1.2 18,322 + EX28DRAFT_3351 0.44 -3.0 18,323 - EX28DRAFT_3351 0.45 +0.5 18,359 + EX28DRAFT_3351 0.49 -0.3 18,360 - EX28DRAFT_3351 0.49 -0.0 18,439 + EX28DRAFT_3351 0.58 +0.0 18,450 + EX28DRAFT_3351 0.59 -0.4 18,490 + EX28DRAFT_3351 0.64 +0.7 18,507 - EX28DRAFT_3351 0.66 +0.2 18,507 - EX28DRAFT_3351 0.66 -1.2 18,667 - EX28DRAFT_3351 0.84 +0.2 18,807 - -0.3 18,893 + EX28DRAFT_3352 0.15 -1.4 18,893 + EX28DRAFT_3352 0.15 +0.4 18,893 + EX28DRAFT_3352 0.15 -0.3 18,894 - EX28DRAFT_3352 0.16 +0.2 19,083 + EX28DRAFT_3352 0.68 -0.4 19,274 - EX28DRAFT_3353 0.17 +0.4 19,471 - EX28DRAFT_3353 0.66 -0.6 19,528 - EX28DRAFT_3353 0.81 +1.1 19,581 + -1.3 19,581 + -0.4 19,582 - +0.5 19,582 - -0.2 19,582 - -1.1 19,582 - -0.1 19,615 + -0.1 19,772 + EX28DRAFT_3354 0.21 -0.3 19,772 + EX28DRAFT_3354 0.21 +0.1 19,772 + EX28DRAFT_3354 0.21 -0.3 19,773 - EX28DRAFT_3354 0.22 -0.8
Or see this region's nucleotide sequence