Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3308 and EX28DRAFT_3309 are separated by 108 nucleotides EX28DRAFT_3309 and EX28DRAFT_3310 overlap by 11 nucleotides EX28DRAFT_3310 and EX28DRAFT_3311 are separated by 11 nucleotides
EX28DRAFT_3308: EX28DRAFT_3308 - acetyl-CoA carboxylase, biotin carboxylase subunit, at 608,116 to 609,465
_3308
EX28DRAFT_3309: EX28DRAFT_3309 - Predicted membrane protein, at 609,574 to 609,816
_3309
EX28DRAFT_3310: EX28DRAFT_3310 - sodium/pantothenate symporter, at 609,806 to 611,257
_3310
EX28DRAFT_3311: EX28DRAFT_3311 - ribosomal protein L11 methyltransferase, at 611,269 to 612,150
_3311
Position (kb) 609
610
611
612 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 609.507 kb on + strand at 609.537 kb on + strand at 609.537 kb on + strand at 609.637 kb on + strand, within EX28DRAFT_3309 at 609.638 kb on - strand, within EX28DRAFT_3309 at 609.778 kb on + strand, within EX28DRAFT_3309 at 609.840 kb on - strand at 609.971 kb on + strand, within EX28DRAFT_3310 at 610.016 kb on - strand, within EX28DRAFT_3310 at 610.118 kb on + strand, within EX28DRAFT_3310 at 610.120 kb on + strand, within EX28DRAFT_3310 at 610.142 kb on - strand, within EX28DRAFT_3310 at 610.191 kb on + strand, within EX28DRAFT_3310 at 610.191 kb on + strand, within EX28DRAFT_3310 at 610.319 kb on + strand, within EX28DRAFT_3310 at 610.320 kb on - strand, within EX28DRAFT_3310 at 610.519 kb on + strand, within EX28DRAFT_3310 at 610.585 kb on + strand, within EX28DRAFT_3310 at 610.585 kb on + strand, within EX28DRAFT_3310 at 610.624 kb on + strand, within EX28DRAFT_3310 at 610.625 kb on - strand, within EX28DRAFT_3310 at 610.663 kb on + strand, within EX28DRAFT_3310 at 610.696 kb on + strand, within EX28DRAFT_3310 at 610.696 kb on + strand, within EX28DRAFT_3310 at 610.697 kb on - strand, within EX28DRAFT_3310 at 610.697 kb on - strand, within EX28DRAFT_3310 at 610.750 kb on - strand, within EX28DRAFT_3310 at 610.802 kb on - strand, within EX28DRAFT_3310 at 610.924 kb on + strand, within EX28DRAFT_3310 at 610.925 kb on - strand, within EX28DRAFT_3310 at 611.256 kb on - strand at 611.464 kb on - strand, within EX28DRAFT_3311 at 612.192 kb on + strand at 612.192 kb on + strand at 612.251 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 609,507 + -0.1 609,537 + -0.0 609,537 + -0.3 609,637 + EX28DRAFT_3309 0.26 -0.4 609,638 - EX28DRAFT_3309 0.26 +0.1 609,778 + EX28DRAFT_3309 0.84 -0.3 609,840 - -0.2 609,971 + EX28DRAFT_3310 0.11 -0.1 610,016 - EX28DRAFT_3310 0.14 +0.1 610,118 + EX28DRAFT_3310 0.21 -2.5 610,120 + EX28DRAFT_3310 0.22 +0.8 610,142 - EX28DRAFT_3310 0.23 -0.2 610,191 + EX28DRAFT_3310 0.27 -0.2 610,191 + EX28DRAFT_3310 0.27 -0.3 610,319 + EX28DRAFT_3310 0.35 -0.2 610,320 - EX28DRAFT_3310 0.35 +0.7 610,519 + EX28DRAFT_3310 0.49 -0.3 610,585 + EX28DRAFT_3310 0.54 +0.5 610,585 + EX28DRAFT_3310 0.54 +0.7 610,624 + EX28DRAFT_3310 0.56 +0.0 610,625 - EX28DRAFT_3310 0.56 -3.0 610,663 + EX28DRAFT_3310 0.59 -0.2 610,696 + EX28DRAFT_3310 0.61 -0.1 610,696 + EX28DRAFT_3310 0.61 -0.2 610,697 - EX28DRAFT_3310 0.61 -3.3 610,697 - EX28DRAFT_3310 0.61 -1.0 610,750 - EX28DRAFT_3310 0.65 -1.7 610,802 - EX28DRAFT_3310 0.69 -0.2 610,924 + EX28DRAFT_3310 0.77 +0.0 610,925 - EX28DRAFT_3310 0.77 +0.1 611,256 - -0.1 611,464 - EX28DRAFT_3311 0.22 -0.0 612,192 + -0.3 612,192 + -0.1 612,251 + -0.4
Or see this region's nucleotide sequence