Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3294 and EX28DRAFT_3295 are separated by 77 nucleotides EX28DRAFT_3295 and EX28DRAFT_3296 are separated by 84 nucleotides
EX28DRAFT_3294: EX28DRAFT_3294 - Transcriptional regulator, at 590,824 to 591,750
_3294
EX28DRAFT_3295: EX28DRAFT_3295 - Predicted Zn-dependent proteases and their inactivated homologs, at 591,828 to 593,273
_3295
EX28DRAFT_3296: EX28DRAFT_3296 - TIGR02099 family protein, at 593,358 to 597,161
_3296
Position (kb) 591
592
593
594 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 591.036 kb on + strand, within EX28DRAFT_3294 at 591.037 kb on - strand, within EX28DRAFT_3294 at 591.073 kb on + strand, within EX28DRAFT_3294 at 591.073 kb on + strand, within EX28DRAFT_3294 at 591.126 kb on + strand, within EX28DRAFT_3294 at 591.126 kb on + strand, within EX28DRAFT_3294 at 591.535 kb on + strand, within EX28DRAFT_3294 at 591.536 kb on - strand, within EX28DRAFT_3294 at 591.634 kb on + strand, within EX28DRAFT_3294 at 591.635 kb on - strand, within EX28DRAFT_3294 at 591.666 kb on - strand at 591.675 kb on + strand at 591.675 kb on + strand at 591.675 kb on + strand at 591.676 kb on - strand at 591.678 kb on + strand at 591.678 kb on + strand at 591.678 kb on + strand at 591.678 kb on + strand at 591.678 kb on + strand at 591.679 kb on - strand at 591.679 kb on - strand at 591.679 kb on - strand at 591.679 kb on - strand at 591.679 kb on - strand at 591.682 kb on + strand at 591.682 kb on + strand at 591.683 kb on - strand at 591.694 kb on + strand at 591.695 kb on - strand at 591.748 kb on + strand at 591.829 kb on + strand at 592.042 kb on + strand, within EX28DRAFT_3295 at 592.043 kb on - strand, within EX28DRAFT_3295 at 592.174 kb on + strand, within EX28DRAFT_3295 at 592.174 kb on + strand, within EX28DRAFT_3295 at 592.175 kb on - strand, within EX28DRAFT_3295 at 592.182 kb on - strand, within EX28DRAFT_3295 at 592.210 kb on + strand, within EX28DRAFT_3295 at 592.279 kb on + strand, within EX28DRAFT_3295 at 592.280 kb on - strand, within EX28DRAFT_3295 at 592.786 kb on + strand, within EX28DRAFT_3295 at 592.915 kb on + strand, within EX28DRAFT_3295 at 592.915 kb on + strand, within EX28DRAFT_3295 at 593.035 kb on + strand, within EX28DRAFT_3295 at 593.096 kb on - strand, within EX28DRAFT_3295 at 593.124 kb on + strand, within EX28DRAFT_3295 at 593.125 kb on - strand, within EX28DRAFT_3295 at 593.158 kb on + strand at 593.158 kb on + strand at 593.256 kb on + strand at 593.276 kb on + strand at 593.276 kb on + strand at 593.276 kb on + strand at 593.277 kb on - strand at 593.282 kb on + strand at 593.308 kb on + strand at 593.308 kb on + strand at 593.310 kb on + strand at 593.310 kb on + strand at 593.310 kb on + strand at 593.311 kb on - strand at 593.319 kb on + strand at 593.319 kb on + strand at 593.320 kb on - strand at 593.412 kb on - strand at 593.707 kb on + strand at 593.727 kb on - strand at 593.945 kb on + strand, within EX28DRAFT_3296 at 593.985 kb on - strand, within EX28DRAFT_3296 at 594.239 kb on + strand, within EX28DRAFT_3296 at 594.240 kb on - strand, within EX28DRAFT_3296 at 594.272 kb on - strand, within EX28DRAFT_3296
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 591,036 + EX28DRAFT_3294 0.23 -0.1 591,037 - EX28DRAFT_3294 0.23 +1.3 591,073 + EX28DRAFT_3294 0.27 +0.5 591,073 + EX28DRAFT_3294 0.27 -0.4 591,126 + EX28DRAFT_3294 0.33 -0.1 591,126 + EX28DRAFT_3294 0.33 -1.1 591,535 + EX28DRAFT_3294 0.77 -0.4 591,536 - EX28DRAFT_3294 0.77 -0.9 591,634 + EX28DRAFT_3294 0.87 +0.4 591,635 - EX28DRAFT_3294 0.87 -0.8 591,666 - -0.5 591,675 + -0.7 591,675 + -0.0 591,675 + +0.0 591,676 - -0.2 591,678 + -0.2 591,678 + +0.5 591,678 + +0.1 591,678 + +0.5 591,678 + -1.2 591,679 - -0.2 591,679 - -0.3 591,679 - +0.5 591,679 - -0.1 591,679 - +1.5 591,682 + -0.7 591,682 + +0.5 591,683 - -0.2 591,694 + +0.1 591,695 - -0.6 591,748 + -0.3 591,829 + +0.8 592,042 + EX28DRAFT_3295 0.15 -1.4 592,043 - EX28DRAFT_3295 0.15 -2.8 592,174 + EX28DRAFT_3295 0.24 -0.2 592,174 + EX28DRAFT_3295 0.24 -0.2 592,175 - EX28DRAFT_3295 0.24 +0.2 592,182 - EX28DRAFT_3295 0.24 +0.9 592,210 + EX28DRAFT_3295 0.26 +0.5 592,279 + EX28DRAFT_3295 0.31 -0.6 592,280 - EX28DRAFT_3295 0.31 -0.4 592,786 + EX28DRAFT_3295 0.66 -0.3 592,915 + EX28DRAFT_3295 0.75 -1.1 592,915 + EX28DRAFT_3295 0.75 +1.7 593,035 + EX28DRAFT_3295 0.83 -0.8 593,096 - EX28DRAFT_3295 0.88 -1.5 593,124 + EX28DRAFT_3295 0.90 +0.4 593,125 - EX28DRAFT_3295 0.90 -0.9 593,158 + -0.1 593,158 + -0.6 593,256 + -0.4 593,276 + +0.9 593,276 + -0.4 593,276 + +0.1 593,277 - -0.4 593,282 + -1.6 593,308 + -1.8 593,308 + -0.1 593,310 + -0.2 593,310 + -0.4 593,310 + -2.4 593,311 - +0.3 593,319 + -0.7 593,319 + -1.2 593,320 - +0.2 593,412 - +2.2 593,707 + +0.5 593,727 - -0.9 593,945 + EX28DRAFT_3296 0.15 -2.8 593,985 - EX28DRAFT_3296 0.16 -0.2 594,239 + EX28DRAFT_3296 0.23 -0.7 594,240 - EX28DRAFT_3296 0.23 -0.1 594,272 - EX28DRAFT_3296 0.24 -0.5
Or see this region's nucleotide sequence