Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3184 and EX28DRAFT_3185 are separated by 72 nucleotides EX28DRAFT_3185 and EX28DRAFT_3186 are separated by 251 nucleotides
EX28DRAFT_3184: EX28DRAFT_3184 - galactarate dehydratase, at 484,415 to 485,986
_3184
EX28DRAFT_3185: EX28DRAFT_3185 - transcriptional regulator, DeoR family, at 486,059 to 486,862
_3185
EX28DRAFT_3186: EX28DRAFT_3186 - D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit, at 487,114 to 488,409
_3186
Position (kb) 486
487 Strain fitness (log2 ratio) -2
-1
0
1
2 at 485.473 kb on + strand, within EX28DRAFT_3184 at 485.478 kb on - strand, within EX28DRAFT_3184 at 485.478 kb on - strand, within EX28DRAFT_3184 at 485.478 kb on - strand, within EX28DRAFT_3184 at 485.707 kb on + strand, within EX28DRAFT_3184 at 485.808 kb on - strand, within EX28DRAFT_3184 at 485.814 kb on + strand, within EX28DRAFT_3184 at 485.943 kb on + strand at 485.943 kb on + strand at 485.944 kb on - strand at 485.944 kb on - strand at 485.947 kb on + strand at 485.947 kb on + strand at 485.948 kb on - strand at 486.134 kb on - strand at 486.215 kb on - strand, within EX28DRAFT_3185 at 486.508 kb on - strand, within EX28DRAFT_3185 at 486.596 kb on - strand, within EX28DRAFT_3185 at 486.947 kb on - strand at 486.947 kb on - strand at 486.951 kb on - strand at 487.040 kb on - strand at 487.092 kb on - strand at 487.147 kb on - strand at 487.171 kb on + strand at 487.171 kb on + strand at 487.171 kb on + strand at 487.621 kb on + strand, within EX28DRAFT_3186 at 487.773 kb on + strand, within EX28DRAFT_3186
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 485,473 + EX28DRAFT_3184 0.67 -0.0 485,478 - EX28DRAFT_3184 0.68 -0.6 485,478 - EX28DRAFT_3184 0.68 -0.1 485,478 - EX28DRAFT_3184 0.68 -2.0 485,707 + EX28DRAFT_3184 0.82 -0.4 485,808 - EX28DRAFT_3184 0.89 -0.8 485,814 + EX28DRAFT_3184 0.89 -0.2 485,943 + +0.5 485,943 + -0.6 485,944 - +0.1 485,944 - -0.6 485,947 + +2.3 485,947 + +0.0 485,948 - -0.2 486,134 - -0.3 486,215 - EX28DRAFT_3185 0.19 -1.3 486,508 - EX28DRAFT_3185 0.56 -2.5 486,596 - EX28DRAFT_3185 0.67 -0.3 486,947 - -0.2 486,947 - -0.2 486,951 - +0.1 487,040 - -0.2 487,092 - -0.1 487,147 - -2.5 487,171 + +1.3 487,171 + +0.4 487,171 + -0.1 487,621 + EX28DRAFT_3186 0.39 +0.5 487,773 + EX28DRAFT_3186 0.51 +0.2
Or see this region's nucleotide sequence