Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3148 and EX28DRAFT_3149 overlap by 4 nucleotides EX28DRAFT_3149 and EX28DRAFT_3150 are separated by 215 nucleotides
EX28DRAFT_3148: EX28DRAFT_3148 - Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components, at 447,998 to 449,029
_3148
EX28DRAFT_3149: EX28DRAFT_3149 - ABC-type sugar transport system, ATPase component, at 449,026 to 450,513
_3149
EX28DRAFT_3150: EX28DRAFT_3150 - Transcriptional regulator, contains sigma factor-related N-terminal domain, at 450,729 to 451,697
_3150
Position (kb) 449
450
451 Strain fitness (log2 ratio) -1
0
1 at 448.074 kb on + strand at 448.399 kb on + strand, within EX28DRAFT_3148 at 448.783 kb on + strand, within EX28DRAFT_3148 at 448.786 kb on + strand, within EX28DRAFT_3148 at 449.214 kb on - strand, within EX28DRAFT_3149 at 449.607 kb on - strand, within EX28DRAFT_3149 at 449.675 kb on + strand, within EX28DRAFT_3149 at 449.676 kb on - strand, within EX28DRAFT_3149 at 450.033 kb on + strand, within EX28DRAFT_3149 at 450.269 kb on + strand, within EX28DRAFT_3149 at 450.270 kb on - strand, within EX28DRAFT_3149 at 450.311 kb on + strand, within EX28DRAFT_3149 at 450.311 kb on + strand, within EX28DRAFT_3149 at 450.550 kb on - strand at 450.550 kb on - strand at 450.580 kb on - strand at 450.581 kb on + strand at 450.581 kb on + strand at 450.581 kb on + strand at 450.582 kb on - strand at 450.611 kb on - strand at 450.699 kb on + strand at 450.699 kb on + strand at 450.728 kb on + strand at 450.820 kb on - strand at 450.974 kb on - strand, within EX28DRAFT_3150 at 451.022 kb on + strand, within EX28DRAFT_3150 at 451.207 kb on - strand, within EX28DRAFT_3150 at 451.209 kb on - strand, within EX28DRAFT_3150 at 451.301 kb on - strand, within EX28DRAFT_3150 at 451.417 kb on - strand, within EX28DRAFT_3150 at 451.419 kb on - strand, within EX28DRAFT_3150 at 451.419 kb on - strand, within EX28DRAFT_3150 at 451.444 kb on - strand, within EX28DRAFT_3150
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 448,074 + +0.3 448,399 + EX28DRAFT_3148 0.39 -0.8 448,783 + EX28DRAFT_3148 0.76 -0.1 448,786 + EX28DRAFT_3148 0.76 +0.2 449,214 - EX28DRAFT_3149 0.13 -0.1 449,607 - EX28DRAFT_3149 0.39 +1.1 449,675 + EX28DRAFT_3149 0.44 +1.5 449,676 - EX28DRAFT_3149 0.44 -0.2 450,033 + EX28DRAFT_3149 0.68 -0.4 450,269 + EX28DRAFT_3149 0.84 +0.3 450,270 - EX28DRAFT_3149 0.84 -0.0 450,311 + EX28DRAFT_3149 0.86 +0.7 450,311 + EX28DRAFT_3149 0.86 +0.2 450,550 - -0.5 450,550 - -0.5 450,580 - +0.1 450,581 + -0.0 450,581 + -0.2 450,581 + -0.9 450,582 - -0.9 450,611 - +0.0 450,699 + -0.7 450,699 + -0.8 450,728 + -0.4 450,820 - -0.7 450,974 - EX28DRAFT_3150 0.25 +0.3 451,022 + EX28DRAFT_3150 0.30 +0.2 451,207 - EX28DRAFT_3150 0.49 -0.7 451,209 - EX28DRAFT_3150 0.50 -1.3 451,301 - EX28DRAFT_3150 0.59 +0.2 451,417 - EX28DRAFT_3150 0.71 +0.1 451,419 - EX28DRAFT_3150 0.71 -1.4 451,419 - EX28DRAFT_3150 0.71 -1.0 451,444 - EX28DRAFT_3150 0.74 +0.6
Or see this region's nucleotide sequence