Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3056 and EX28DRAFT_3057 are separated by 139 nucleotides EX28DRAFT_3057 and EX28DRAFT_3058 overlap by 4 nucleotides EX28DRAFT_3058 and EX28DRAFT_3059 are separated by 104 nucleotides EX28DRAFT_3059 and EX28DRAFT_3060 are separated by 31 nucleotides
EX28DRAFT_3056: EX28DRAFT_3056 - TIGR00156 family protein, at 366,988 to 367,389
_3056
EX28DRAFT_3057: EX28DRAFT_3057 - Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain, at 367,529 to 368,188
_3057
EX28DRAFT_3058: EX28DRAFT_3058 - Signal transduction histidine kinase, at 368,185 to 369,534
_3058
EX28DRAFT_3059: EX28DRAFT_3059 - Putative NADPH-quinone reductase (modulator of drug activity B), at 369,639 to 370,220
_3059
EX28DRAFT_3060: EX28DRAFT_3060 - Uncharacterized conserved protein, at 370,252 to 370,566
_3060
Position (kb) 368
369
370 Strain fitness (log2 ratio) -2
-1
0
1 at 367.427 kb on + strand at 367.427 kb on + strand at 367.427 kb on + strand at 367.443 kb on - strand at 367.470 kb on + strand at 367.471 kb on - strand at 367.481 kb on + strand at 367.506 kb on - strand at 367.546 kb on - strand at 367.662 kb on - strand, within EX28DRAFT_3057 at 367.820 kb on + strand, within EX28DRAFT_3057 at 367.821 kb on - strand, within EX28DRAFT_3057 at 367.821 kb on - strand, within EX28DRAFT_3057 at 367.821 kb on - strand, within EX28DRAFT_3057 at 367.828 kb on + strand, within EX28DRAFT_3057 at 367.845 kb on + strand, within EX28DRAFT_3057 at 367.845 kb on + strand, within EX28DRAFT_3057 at 368.063 kb on + strand, within EX28DRAFT_3057 at 368.063 kb on + strand, within EX28DRAFT_3057 at 368.064 kb on - strand, within EX28DRAFT_3057 at 368.064 kb on - strand, within EX28DRAFT_3057 at 368.065 kb on + strand, within EX28DRAFT_3057 at 369.020 kb on + strand, within EX28DRAFT_3058 at 369.020 kb on + strand, within EX28DRAFT_3058 at 369.132 kb on - strand, within EX28DRAFT_3058 at 369.615 kb on + strand at 369.637 kb on + strand at 369.686 kb on + strand at 369.686 kb on + strand at 369.780 kb on + strand, within EX28DRAFT_3059 at 369.824 kb on - strand, within EX28DRAFT_3059 at 369.824 kb on - strand, within EX28DRAFT_3059 at 369.871 kb on + strand, within EX28DRAFT_3059 at 369.879 kb on + strand, within EX28DRAFT_3059 at 369.880 kb on - strand, within EX28DRAFT_3059 at 369.918 kb on + strand, within EX28DRAFT_3059 at 369.993 kb on + strand, within EX28DRAFT_3059 at 369.995 kb on + strand, within EX28DRAFT_3059 at 369.995 kb on + strand, within EX28DRAFT_3059 at 370.176 kb on + strand at 370.177 kb on - strand at 370.177 kb on - strand at 370.188 kb on + strand at 370.219 kb on - strand at 370.219 kb on - strand at 370.245 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 367,427 + -0.3 367,427 + +0.0 367,427 + -0.1 367,443 - -0.6 367,470 + -0.2 367,471 - -2.3 367,481 + +1.4 367,506 - +0.4 367,546 - -0.8 367,662 - EX28DRAFT_3057 0.20 -0.5 367,820 + EX28DRAFT_3057 0.44 -0.4 367,821 - EX28DRAFT_3057 0.44 -1.2 367,821 - EX28DRAFT_3057 0.44 +0.9 367,821 - EX28DRAFT_3057 0.44 +0.1 367,828 + EX28DRAFT_3057 0.45 -0.3 367,845 + EX28DRAFT_3057 0.48 +0.3 367,845 + EX28DRAFT_3057 0.48 +0.1 368,063 + EX28DRAFT_3057 0.81 -0.9 368,063 + EX28DRAFT_3057 0.81 -1.2 368,064 - EX28DRAFT_3057 0.81 -0.2 368,064 - EX28DRAFT_3057 0.81 +0.1 368,065 + EX28DRAFT_3057 0.81 +0.0 369,020 + EX28DRAFT_3058 0.62 -1.1 369,020 + EX28DRAFT_3058 0.62 -0.8 369,132 - EX28DRAFT_3058 0.70 -2.1 369,615 + -0.0 369,637 + -1.4 369,686 + +0.7 369,686 + -0.4 369,780 + EX28DRAFT_3059 0.24 +0.4 369,824 - EX28DRAFT_3059 0.32 -0.3 369,824 - EX28DRAFT_3059 0.32 +0.2 369,871 + EX28DRAFT_3059 0.40 +0.2 369,879 + EX28DRAFT_3059 0.41 +0.0 369,880 - EX28DRAFT_3059 0.41 -2.2 369,918 + EX28DRAFT_3059 0.48 -0.3 369,993 + EX28DRAFT_3059 0.61 +0.3 369,995 + EX28DRAFT_3059 0.61 +0.1 369,995 + EX28DRAFT_3059 0.61 -0.7 370,176 + +1.4 370,177 - +0.0 370,177 - -1.0 370,188 + -0.6 370,219 - -1.2 370,219 - -0.4 370,245 - +0.1
Or see this region's nucleotide sequence