Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2966 and EX28DRAFT_2967 are separated by 127 nucleotides EX28DRAFT_2967 and EX28DRAFT_2968 are separated by 48 nucleotides EX28DRAFT_2968 and EX28DRAFT_2969 are separated by 91 nucleotides
EX28DRAFT_2966: EX28DRAFT_2966 - ribose-5-phosphate isomerase (EC 5.3.1.6), at 276,106 to 276,765
_2966
EX28DRAFT_2967: EX28DRAFT_2967 - transcriptional regulator, ArgP family, at 276,893 to 277,786
_2967
EX28DRAFT_2968: EX28DRAFT_2968 - Uncharacterized conserved protein, at 277,835 to 278,575
_2968
EX28DRAFT_2969: EX28DRAFT_2969 - L-lysine exporter, at 278,667 to 279,302
_2969
Position (kb) 276
277
278 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 275.904 kb on - strand at 275.927 kb on + strand at 276.112 kb on + strand at 276.113 kb on - strand at 276.805 kb on + strand at 276.805 kb on + strand at 276.805 kb on + strand at 276.806 kb on - strand at 276.806 kb on - strand at 276.806 kb on - strand at 276.806 kb on - strand at 276.854 kb on + strand at 276.864 kb on + strand at 276.864 kb on + strand at 276.875 kb on - strand at 276.918 kb on + strand at 276.918 kb on + strand at 276.918 kb on + strand at 276.938 kb on - strand at 277.007 kb on - strand, within EX28DRAFT_2967 at 277.676 kb on + strand, within EX28DRAFT_2967 at 277.694 kb on + strand, within EX28DRAFT_2967 at 277.695 kb on - strand, within EX28DRAFT_2967 at 277.784 kb on + strand at 277.836 kb on + strand at 277.847 kb on - strand at 277.932 kb on + strand, within EX28DRAFT_2968 at 277.932 kb on + strand, within EX28DRAFT_2968 at 277.932 kb on + strand, within EX28DRAFT_2968 at 277.933 kb on - strand, within EX28DRAFT_2968 at 278.002 kb on + strand, within EX28DRAFT_2968 at 278.003 kb on - strand, within EX28DRAFT_2968 at 278.003 kb on - strand, within EX28DRAFT_2968 at 278.026 kb on - strand, within EX28DRAFT_2968 at 278.200 kb on + strand, within EX28DRAFT_2968 at 278.200 kb on + strand, within EX28DRAFT_2968 at 278.201 kb on - strand, within EX28DRAFT_2968 at 278.206 kb on + strand, within EX28DRAFT_2968 at 278.206 kb on + strand, within EX28DRAFT_2968 at 278.270 kb on - strand, within EX28DRAFT_2968 at 278.286 kb on + strand, within EX28DRAFT_2968 at 278.287 kb on - strand, within EX28DRAFT_2968 at 278.299 kb on + strand, within EX28DRAFT_2968 at 278.299 kb on + strand, within EX28DRAFT_2968 at 278.300 kb on - strand, within EX28DRAFT_2968 at 278.303 kb on + strand, within EX28DRAFT_2968 at 278.303 kb on + strand, within EX28DRAFT_2968 at 278.304 kb on - strand, within EX28DRAFT_2968 at 278.319 kb on + strand, within EX28DRAFT_2968 at 278.321 kb on - strand, within EX28DRAFT_2968 at 278.329 kb on + strand, within EX28DRAFT_2968 at 278.330 kb on - strand, within EX28DRAFT_2968 at 278.333 kb on + strand, within EX28DRAFT_2968 at 278.362 kb on - strand, within EX28DRAFT_2968 at 278.541 kb on - strand at 278.544 kb on - strand at 278.544 kb on - strand at 278.579 kb on + strand at 278.633 kb on - strand at 278.656 kb on + strand at 278.656 kb on + strand at 278.657 kb on - strand at 278.750 kb on + strand, within EX28DRAFT_2969 at 278.750 kb on + strand, within EX28DRAFT_2969 at 278.750 kb on + strand, within EX28DRAFT_2969 at 278.751 kb on - strand, within EX28DRAFT_2969 at 278.751 kb on - strand, within EX28DRAFT_2969 at 278.754 kb on + strand, within EX28DRAFT_2969 at 278.755 kb on - strand, within EX28DRAFT_2969
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 275,904 - -2.9 275,927 + -1.3 276,112 + -4.6 276,113 - -0.6 276,805 + -0.5 276,805 + +1.1 276,805 + -1.7 276,806 - -0.8 276,806 - +0.1 276,806 - -0.3 276,806 - +0.4 276,854 + +0.2 276,864 + -0.1 276,864 + +0.3 276,875 - -0.5 276,918 + -0.5 276,918 + -1.6 276,918 + -0.6 276,938 - -1.1 277,007 - EX28DRAFT_2967 0.13 -1.5 277,676 + EX28DRAFT_2967 0.88 -0.7 277,694 + EX28DRAFT_2967 0.90 -0.6 277,695 - EX28DRAFT_2967 0.90 -0.9 277,784 + +0.3 277,836 + +0.2 277,847 - +0.2 277,932 + EX28DRAFT_2968 0.13 -0.0 277,932 + EX28DRAFT_2968 0.13 -1.1 277,932 + EX28DRAFT_2968 0.13 -1.0 277,933 - EX28DRAFT_2968 0.13 -0.2 278,002 + EX28DRAFT_2968 0.23 -2.3 278,003 - EX28DRAFT_2968 0.23 -0.3 278,003 - EX28DRAFT_2968 0.23 -0.2 278,026 - EX28DRAFT_2968 0.26 -0.9 278,200 + EX28DRAFT_2968 0.49 +0.4 278,200 + EX28DRAFT_2968 0.49 +1.0 278,201 - EX28DRAFT_2968 0.49 -1.5 278,206 + EX28DRAFT_2968 0.50 +0.1 278,206 + EX28DRAFT_2968 0.50 -0.7 278,270 - EX28DRAFT_2968 0.59 +0.1 278,286 + EX28DRAFT_2968 0.61 -1.6 278,287 - EX28DRAFT_2968 0.61 -1.1 278,299 + EX28DRAFT_2968 0.63 +0.6 278,299 + EX28DRAFT_2968 0.63 -0.6 278,300 - EX28DRAFT_2968 0.63 +0.3 278,303 + EX28DRAFT_2968 0.63 +0.3 278,303 + EX28DRAFT_2968 0.63 -0.3 278,304 - EX28DRAFT_2968 0.63 -0.0 278,319 + EX28DRAFT_2968 0.65 -0.4 278,321 - EX28DRAFT_2968 0.66 -0.2 278,329 + EX28DRAFT_2968 0.67 -0.1 278,330 - EX28DRAFT_2968 0.67 -2.7 278,333 + EX28DRAFT_2968 0.67 -1.1 278,362 - EX28DRAFT_2968 0.71 -0.1 278,541 - -1.4 278,544 - -1.3 278,544 - +0.6 278,579 + +1.6 278,633 - -0.1 278,656 + +0.1 278,656 + +1.1 278,657 - -0.3 278,750 + EX28DRAFT_2969 0.13 +0.2 278,750 + EX28DRAFT_2969 0.13 -1.2 278,750 + EX28DRAFT_2969 0.13 +0.5 278,751 - EX28DRAFT_2969 0.13 -0.6 278,751 - EX28DRAFT_2969 0.13 -0.2 278,754 + EX28DRAFT_2969 0.14 -0.5 278,755 - EX28DRAFT_2969 0.14 -0.5
Or see this region's nucleotide sequence