Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2960 and EX28DRAFT_2961 are separated by 25 nucleotides EX28DRAFT_2961 and EX28DRAFT_2962 are separated by 168 nucleotides EX28DRAFT_2962 and EX28DRAFT_2963 are separated by 41 nucleotides EX28DRAFT_2963 and EX28DRAFT_2964 are separated by 24 nucleotides
EX28DRAFT_2960: EX28DRAFT_2960 - Xaa-Pro aminopeptidase, at 271,230 to 272,549
_2960
EX28DRAFT_2961: EX28DRAFT_2961 - yecA family protein, at 272,575 to 273,153
_2961
EX28DRAFT_2962: EX28DRAFT_2962 - Uncharacterized protein conserved in bacteria, at 273,322 to 273,651
_2962
EX28DRAFT_2963: EX28DRAFT_2963 - RNA, at 273,693 to 273,876
_2963
EX28DRAFT_2964: EX28DRAFT_2964 - 5,10-methenyltetrahydrofolate synthetase, at 273,901 to 274,497
_2964
Position (kb) 272
273
274 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 271.757 kb on - strand, within EX28DRAFT_2960 at 271.865 kb on - strand, within EX28DRAFT_2960 at 272.355 kb on - strand, within EX28DRAFT_2960 at 272.355 kb on - strand, within EX28DRAFT_2960 at 272.528 kb on - strand at 272.582 kb on - strand at 272.740 kb on - strand, within EX28DRAFT_2961 at 272.889 kb on - strand, within EX28DRAFT_2961 at 273.125 kb on + strand at 273.147 kb on + strand at 273.148 kb on - strand at 273.189 kb on - strand at 273.189 kb on - strand at 273.231 kb on + strand at 273.231 kb on + strand at 273.248 kb on - strand at 273.251 kb on + strand at 273.251 kb on + strand at 273.251 kb on + strand at 273.251 kb on + strand at 273.252 kb on - strand at 273.252 kb on - strand at 273.252 kb on - strand at 273.252 kb on - strand at 273.252 kb on - strand at 273.252 kb on - strand at 273.253 kb on + strand at 273.253 kb on + strand at 273.254 kb on - strand at 273.285 kb on - strand at 273.508 kb on + strand, within EX28DRAFT_2962 at 273.509 kb on - strand, within EX28DRAFT_2962 at 273.545 kb on - strand, within EX28DRAFT_2962 at 273.590 kb on + strand, within EX28DRAFT_2962 at 273.591 kb on - strand, within EX28DRAFT_2962 at 273.591 kb on - strand, within EX28DRAFT_2962 at 273.668 kb on - strand at 273.668 kb on - strand at 273.672 kb on + strand at 273.672 kb on + strand at 273.673 kb on - strand at 273.677 kb on + strand at 273.678 kb on - strand at 273.736 kb on + strand, within EX28DRAFT_2963 at 273.737 kb on - strand, within EX28DRAFT_2963 at 273.803 kb on - strand, within EX28DRAFT_2963 at 273.808 kb on + strand, within EX28DRAFT_2963 at 273.809 kb on - strand, within EX28DRAFT_2963 at 274.138 kb on + strand, within EX28DRAFT_2964
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 271,757 - EX28DRAFT_2960 0.40 -0.5 271,865 - EX28DRAFT_2960 0.48 -0.3 272,355 - EX28DRAFT_2960 0.85 -1.2 272,355 - EX28DRAFT_2960 0.85 -0.4 272,528 - +0.7 272,582 - -0.5 272,740 - EX28DRAFT_2961 0.28 +0.7 272,889 - EX28DRAFT_2961 0.54 +0.2 273,125 + -1.9 273,147 + -3.3 273,148 - -0.3 273,189 - +0.5 273,189 - -1.9 273,231 + +0.3 273,231 + -0.4 273,248 - -1.4 273,251 + +0.1 273,251 + -0.1 273,251 + +0.0 273,251 + -0.6 273,252 - -0.6 273,252 - +0.7 273,252 - +0.3 273,252 - -0.3 273,252 - +0.4 273,252 - -0.4 273,253 + +0.4 273,253 + -1.8 273,254 - -1.7 273,285 - -1.5 273,508 + EX28DRAFT_2962 0.56 -1.4 273,509 - EX28DRAFT_2962 0.57 +0.1 273,545 - EX28DRAFT_2962 0.68 +0.4 273,590 + EX28DRAFT_2962 0.81 +1.4 273,591 - EX28DRAFT_2962 0.82 -1.7 273,591 - EX28DRAFT_2962 0.82 +1.4 273,668 - -1.3 273,668 - +0.4 273,672 + -0.1 273,672 + +0.6 273,673 - -3.3 273,677 + +0.2 273,678 - +0.3 273,736 + EX28DRAFT_2963 0.23 -0.2 273,737 - EX28DRAFT_2963 0.24 +0.3 273,803 - EX28DRAFT_2963 0.60 -0.3 273,808 + EX28DRAFT_2963 0.62 +0.2 273,809 - EX28DRAFT_2963 0.63 +0.0 274,138 + EX28DRAFT_2964 0.40 -0.3
Or see this region's nucleotide sequence