Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2959 and EX28DRAFT_2960 overlap by 4 nucleotides EX28DRAFT_2960 and EX28DRAFT_2961 are separated by 25 nucleotides EX28DRAFT_2961 and EX28DRAFT_2962 are separated by 168 nucleotides
EX28DRAFT_2959: EX28DRAFT_2959 - 2-polyprenyl-6-methoxyphenol 4-hydroxylase, at 270,055 to 271,233
_2959
EX28DRAFT_2960: EX28DRAFT_2960 - Xaa-Pro aminopeptidase, at 271,230 to 272,549
_2960
EX28DRAFT_2961: EX28DRAFT_2961 - yecA family protein, at 272,575 to 273,153
_2961
EX28DRAFT_2962: EX28DRAFT_2962 - Uncharacterized protein conserved in bacteria, at 273,322 to 273,651
_2962
Position (kb) 271
272
273 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 271.391 kb on - strand, within EX28DRAFT_2960 at 271.470 kb on + strand, within EX28DRAFT_2960 at 271.471 kb on - strand, within EX28DRAFT_2960 at 271.471 kb on - strand, within EX28DRAFT_2960 at 271.471 kb on - strand, within EX28DRAFT_2960 at 271.471 kb on - strand, within EX28DRAFT_2960 at 271.757 kb on - strand, within EX28DRAFT_2960 at 271.865 kb on - strand, within EX28DRAFT_2960 at 272.355 kb on - strand, within EX28DRAFT_2960 at 272.355 kb on - strand, within EX28DRAFT_2960 at 272.528 kb on - strand at 272.582 kb on - strand at 272.740 kb on - strand, within EX28DRAFT_2961 at 272.889 kb on - strand, within EX28DRAFT_2961 at 273.125 kb on + strand at 273.147 kb on + strand at 273.148 kb on - strand at 273.189 kb on - strand at 273.189 kb on - strand at 273.231 kb on + strand at 273.231 kb on + strand at 273.248 kb on - strand at 273.251 kb on + strand at 273.251 kb on + strand at 273.251 kb on + strand at 273.251 kb on + strand at 273.252 kb on - strand at 273.252 kb on - strand at 273.252 kb on - strand at 273.252 kb on - strand at 273.252 kb on - strand at 273.252 kb on - strand at 273.253 kb on + strand at 273.253 kb on + strand at 273.254 kb on - strand at 273.285 kb on - strand at 273.508 kb on + strand, within EX28DRAFT_2962 at 273.509 kb on - strand, within EX28DRAFT_2962 at 273.545 kb on - strand, within EX28DRAFT_2962
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 271,391 - EX28DRAFT_2960 0.12 -1.6 271,470 + EX28DRAFT_2960 0.18 -0.9 271,471 - EX28DRAFT_2960 0.18 -1.4 271,471 - EX28DRAFT_2960 0.18 -1.4 271,471 - EX28DRAFT_2960 0.18 -1.2 271,471 - EX28DRAFT_2960 0.18 -1.0 271,757 - EX28DRAFT_2960 0.40 -0.5 271,865 - EX28DRAFT_2960 0.48 -0.3 272,355 - EX28DRAFT_2960 0.85 -1.2 272,355 - EX28DRAFT_2960 0.85 -0.4 272,528 - +0.7 272,582 - -0.5 272,740 - EX28DRAFT_2961 0.28 +0.7 272,889 - EX28DRAFT_2961 0.54 +0.2 273,125 + -1.9 273,147 + -3.3 273,148 - -0.3 273,189 - +0.5 273,189 - -1.9 273,231 + +0.3 273,231 + -0.4 273,248 - -1.4 273,251 + +0.1 273,251 + -0.1 273,251 + +0.0 273,251 + -0.6 273,252 - -0.6 273,252 - +0.7 273,252 - +0.3 273,252 - -0.3 273,252 - +0.4 273,252 - -0.4 273,253 + +0.4 273,253 + -1.8 273,254 - -1.7 273,285 - -1.5 273,508 + EX28DRAFT_2962 0.56 -1.4 273,509 - EX28DRAFT_2962 0.57 +0.1 273,545 - EX28DRAFT_2962 0.68 +0.4
Or see this region's nucleotide sequence