Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2913 and EX28DRAFT_2914 overlap by 40 nucleotides EX28DRAFT_2914 and EX28DRAFT_2915 are separated by 220 nucleotides
EX28DRAFT_2913: EX28DRAFT_2913 - Transcriptional regulators, at 223,711 to 224,727
_2913
EX28DRAFT_2914: EX28DRAFT_2914 - Acetyltransferase (GNAT) family, at 224,688 to 225,173
_2914
EX28DRAFT_2915: EX28DRAFT_2915 - Transcriptional regulators, at 225,394 to 226,431
_2915
Position (kb) 224
225
226 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 223.844 kb on - strand, within EX28DRAFT_2913 at 223.844 kb on - strand, within EX28DRAFT_2913 at 223.844 kb on - strand, within EX28DRAFT_2913 at 224.007 kb on + strand, within EX28DRAFT_2913 at 224.008 kb on - strand, within EX28DRAFT_2913 at 224.306 kb on - strand, within EX28DRAFT_2913 at 224.440 kb on + strand, within EX28DRAFT_2913 at 224.776 kb on + strand, within EX28DRAFT_2914 at 224.776 kb on + strand, within EX28DRAFT_2914 at 224.777 kb on - strand, within EX28DRAFT_2914 at 224.777 kb on - strand, within EX28DRAFT_2914 at 224.859 kb on - strand, within EX28DRAFT_2914 at 224.917 kb on + strand, within EX28DRAFT_2914 at 224.918 kb on - strand, within EX28DRAFT_2914 at 224.918 kb on - strand, within EX28DRAFT_2914 at 225.057 kb on - strand, within EX28DRAFT_2914 at 225.146 kb on - strand at 225.196 kb on + strand at 225.197 kb on - strand at 225.197 kb on - strand at 225.233 kb on + strand at 225.252 kb on + strand at 225.253 kb on - strand at 225.262 kb on + strand at 225.336 kb on + strand at 225.357 kb on + strand at 225.372 kb on + strand at 225.373 kb on - strand at 225.390 kb on + strand at 225.391 kb on - strand at 225.391 kb on - strand at 225.391 kb on - strand at 225.486 kb on + strand at 225.610 kb on + strand, within EX28DRAFT_2915 at 225.611 kb on - strand, within EX28DRAFT_2915 at 225.758 kb on - strand, within EX28DRAFT_2915 at 225.767 kb on - strand, within EX28DRAFT_2915 at 225.904 kb on + strand, within EX28DRAFT_2915 at 225.905 kb on - strand, within EX28DRAFT_2915 at 225.940 kb on - strand, within EX28DRAFT_2915 at 225.993 kb on + strand, within EX28DRAFT_2915 at 226.069 kb on + strand, within EX28DRAFT_2915 at 226.076 kb on + strand, within EX28DRAFT_2915 at 226.076 kb on + strand, within EX28DRAFT_2915 at 226.077 kb on - strand, within EX28DRAFT_2915
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 223,844 - EX28DRAFT_2913 0.13 -0.2 223,844 - EX28DRAFT_2913 0.13 +1.1 223,844 - EX28DRAFT_2913 0.13 -0.7 224,007 + EX28DRAFT_2913 0.29 -0.1 224,008 - EX28DRAFT_2913 0.29 -0.2 224,306 - EX28DRAFT_2913 0.59 +0.8 224,440 + EX28DRAFT_2913 0.72 +1.1 224,776 + EX28DRAFT_2914 0.18 -0.2 224,776 + EX28DRAFT_2914 0.18 -0.3 224,777 - EX28DRAFT_2914 0.18 +0.0 224,777 - EX28DRAFT_2914 0.18 +0.6 224,859 - EX28DRAFT_2914 0.35 +0.7 224,917 + EX28DRAFT_2914 0.47 +1.2 224,918 - EX28DRAFT_2914 0.47 +0.0 224,918 - EX28DRAFT_2914 0.47 -0.8 225,057 - EX28DRAFT_2914 0.76 -0.5 225,146 - -0.0 225,196 + -0.6 225,197 - +0.0 225,197 - +0.1 225,233 + +1.0 225,252 + -0.2 225,253 - +0.3 225,262 + -0.1 225,336 + +0.6 225,357 + -1.4 225,372 + -0.3 225,373 - +0.4 225,390 + -0.4 225,391 - +0.5 225,391 - -3.4 225,391 - -2.3 225,486 + -0.4 225,610 + EX28DRAFT_2915 0.21 +0.1 225,611 - EX28DRAFT_2915 0.21 +0.7 225,758 - EX28DRAFT_2915 0.35 -0.2 225,767 - EX28DRAFT_2915 0.36 -2.0 225,904 + EX28DRAFT_2915 0.49 -0.4 225,905 - EX28DRAFT_2915 0.49 +0.6 225,940 - EX28DRAFT_2915 0.53 -0.2 225,993 + EX28DRAFT_2915 0.58 -2.1 226,069 + EX28DRAFT_2915 0.65 -0.3 226,076 + EX28DRAFT_2915 0.66 -0.5 226,076 + EX28DRAFT_2915 0.66 +0.2 226,077 - EX28DRAFT_2915 0.66 -0.4
Or see this region's nucleotide sequence