Strain Fitness in Enterobacter asburiae PDN3 around EX28DRAFT_2786

Experiment: MS_media with m-arsenite 1 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEX28DRAFT_2785 and EX28DRAFT_2786 are separated by 89 nucleotidesEX28DRAFT_2786 and EX28DRAFT_2787 are separated by 129 nucleotides EX28DRAFT_2785: EX28DRAFT_2785 - protein RecA, at 89,250 to 90,308 _2785 EX28DRAFT_2786: EX28DRAFT_2786 - amidohydrolase, PncC family, at 90,398 to 90,895 _2786 EX28DRAFT_2787: EX28DRAFT_2787 - ABC-type metal ion transport system, periplasmic component/surface adhesin, at 91,025 to 91,882 _2787 Position (kb) 90 91Strain fitness (log2 ratio) -1 0 1at 90.397 kb on - strandat 90.635 kb on - strand, within EX28DRAFT_2786at 90.729 kb on + strand, within EX28DRAFT_2786at 90.730 kb on - strand, within EX28DRAFT_2786at 91.077 kb on + strandat 91.077 kb on + strandat 91.355 kb on - strand, within EX28DRAFT_2787at 91.426 kb on - strand, within EX28DRAFT_2787at 91.426 kb on - strand, within EX28DRAFT_2787at 91.895 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM
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90,397 - +0.7
90,635 - EX28DRAFT_2786 0.48 -1.7
90,729 + EX28DRAFT_2786 0.66 -0.9
90,730 - EX28DRAFT_2786 0.67 -0.2
91,077 + -0.1
91,077 + +0.7
91,355 - EX28DRAFT_2787 0.38 -0.3
91,426 - EX28DRAFT_2787 0.47 -0.8
91,426 - EX28DRAFT_2787 0.47 -1.5
91,895 - -0.7

Or see this region's nucleotide sequence