Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2643 and EX28DRAFT_2644 overlap by 4 nucleotides EX28DRAFT_2644 and EX28DRAFT_2645 are separated by 18 nucleotides
EX28DRAFT_2643: EX28DRAFT_2643 - hypothetical protein, at 2,681,419 to 2,682,153
_2643
EX28DRAFT_2644: EX28DRAFT_2644 - Ogr/Delta-like zinc finger, at 2,682,150 to 2,682,377
_2644
EX28DRAFT_2645: EX28DRAFT_2645 - Phage polarity suppression protein (Psu), at 2,682,396 to 2,682,962
_2645
Position (kb)
2682
2683 Strain fitness (log2 ratio)
-2
-1
0
1 at 2681.239 kb on - strand at 2681.245 kb on + strand at 2681.251 kb on + strand at 2681.251 kb on + strand at 2681.251 kb on + strand at 2681.252 kb on - strand at 2681.252 kb on - strand at 2681.252 kb on - strand at 2681.350 kb on + strand at 2681.368 kb on + strand at 2681.368 kb on + strand at 2681.413 kb on - strand at 2681.443 kb on + strand at 2681.529 kb on + strand, within EX28DRAFT_2643 at 2681.529 kb on + strand, within EX28DRAFT_2643 at 2681.529 kb on + strand, within EX28DRAFT_2643 at 2681.663 kb on + strand, within EX28DRAFT_2643 at 2681.663 kb on + strand, within EX28DRAFT_2643 at 2681.682 kb on - strand, within EX28DRAFT_2643 at 2681.832 kb on + strand, within EX28DRAFT_2643 at 2681.833 kb on - strand, within EX28DRAFT_2643 at 2681.948 kb on - strand, within EX28DRAFT_2643 at 2681.951 kb on + strand, within EX28DRAFT_2643 at 2681.951 kb on + strand, within EX28DRAFT_2643 at 2681.951 kb on + strand, within EX28DRAFT_2643 at 2681.951 kb on + strand, within EX28DRAFT_2643 at 2681.951 kb on + strand, within EX28DRAFT_2643 at 2681.952 kb on - strand, within EX28DRAFT_2643 at 2681.989 kb on - strand, within EX28DRAFT_2643 at 2682.052 kb on - strand, within EX28DRAFT_2643 at 2682.052 kb on - strand, within EX28DRAFT_2643 at 2682.095 kb on - strand at 2682.192 kb on - strand, within EX28DRAFT_2644 at 2682.229 kb on - strand, within EX28DRAFT_2644 at 2682.245 kb on + strand, within EX28DRAFT_2644 at 2682.246 kb on - strand, within EX28DRAFT_2644 at 2682.295 kb on + strand, within EX28DRAFT_2644 at 2682.585 kb on - strand, within EX28DRAFT_2645 at 2682.640 kb on + strand, within EX28DRAFT_2645 at 2682.641 kb on - strand, within EX28DRAFT_2645 at 2682.641 kb on - strand, within EX28DRAFT_2645 at 2682.641 kb on - strand, within EX28DRAFT_2645 at 2682.641 kb on - strand, within EX28DRAFT_2645 at 2682.641 kb on - strand, within EX28DRAFT_2645 at 2682.644 kb on + strand, within EX28DRAFT_2645 at 2682.719 kb on + strand, within EX28DRAFT_2645 at 2682.720 kb on - strand, within EX28DRAFT_2645 at 2682.739 kb on + strand, within EX28DRAFT_2645 at 2682.771 kb on + strand, within EX28DRAFT_2645 at 2683.004 kb on + strand at 2683.020 kb on - strand at 2683.020 kb on - strand at 2683.045 kb on + strand at 2683.111 kb on + strand at 2683.218 kb on - strand at 2683.297 kb on - strand at 2683.353 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 2,681,239 - +1.3 2,681,245 + -0.1 2,681,251 + +0.7 2,681,251 + -0.4 2,681,251 + -0.3 2,681,252 - +0.1 2,681,252 - +0.1 2,681,252 - +0.1 2,681,350 + -0.0 2,681,368 + +0.0 2,681,368 + -0.0 2,681,413 - -0.4 2,681,443 + -1.3 2,681,529 + EX28DRAFT_2643 0.15 -0.0 2,681,529 + EX28DRAFT_2643 0.15 +0.9 2,681,529 + EX28DRAFT_2643 0.15 -0.0 2,681,663 + EX28DRAFT_2643 0.33 +1.0 2,681,663 + EX28DRAFT_2643 0.33 +1.4 2,681,682 - EX28DRAFT_2643 0.36 +0.2 2,681,832 + EX28DRAFT_2643 0.56 +0.1 2,681,833 - EX28DRAFT_2643 0.56 +0.1 2,681,948 - EX28DRAFT_2643 0.72 -1.8 2,681,951 + EX28DRAFT_2643 0.72 -1.0 2,681,951 + EX28DRAFT_2643 0.72 +0.2 2,681,951 + EX28DRAFT_2643 0.72 +0.3 2,681,951 + EX28DRAFT_2643 0.72 -0.7 2,681,951 + EX28DRAFT_2643 0.72 -0.7 2,681,952 - EX28DRAFT_2643 0.73 +0.5 2,681,989 - EX28DRAFT_2643 0.78 -0.2 2,682,052 - EX28DRAFT_2643 0.86 +0.2 2,682,052 - EX28DRAFT_2643 0.86 +0.6 2,682,095 - +0.5 2,682,192 - EX28DRAFT_2644 0.18 -1.2 2,682,229 - EX28DRAFT_2644 0.35 -0.2 2,682,245 + EX28DRAFT_2644 0.42 +1.1 2,682,246 - EX28DRAFT_2644 0.42 -1.2 2,682,295 + EX28DRAFT_2644 0.64 +0.2 2,682,585 - EX28DRAFT_2645 0.33 +0.3 2,682,640 + EX28DRAFT_2645 0.43 +0.9 2,682,641 - EX28DRAFT_2645 0.43 -0.4 2,682,641 - EX28DRAFT_2645 0.43 +0.1 2,682,641 - EX28DRAFT_2645 0.43 +0.1 2,682,641 - EX28DRAFT_2645 0.43 -0.0 2,682,641 - EX28DRAFT_2645 0.43 -0.3 2,682,644 + EX28DRAFT_2645 0.44 -0.0 2,682,719 + EX28DRAFT_2645 0.57 +0.3 2,682,720 - EX28DRAFT_2645 0.57 -1.4 2,682,739 + EX28DRAFT_2645 0.60 +0.1 2,682,771 + EX28DRAFT_2645 0.66 +0.1 2,683,004 + -0.1 2,683,020 - +0.2 2,683,020 - -0.3 2,683,045 + -0.7 2,683,111 + -0.3 2,683,218 - -2.5 2,683,297 - +0.2 2,683,353 - +0.1
Or see this region's nucleotide sequence