Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2535 and EX28DRAFT_2536 are separated by 330 nucleotides EX28DRAFT_2536 and EX28DRAFT_2537 are separated by 308 nucleotides EX28DRAFT_2537 and EX28DRAFT_2538 are separated by 46 nucleotides
EX28DRAFT_2535: EX28DRAFT_2535 - trigger factor, at 2,566,802 to 2,568,100
_2535
EX28DRAFT_2536: EX28DRAFT_2536 - Stress-induced morphogen (activity unknown), at 2,568,431 to 2,568,745
_2536
EX28DRAFT_2537: EX28DRAFT_2537 - Uncharacterized lipoprotein, at 2,569,054 to 2,569,632
_2537
EX28DRAFT_2538: EX28DRAFT_2538 - AmpG-like permease, at 2,569,679 to 2,571,154
_2538
Position (kb)
2568
2569 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2567.522 kb on - strand, within EX28DRAFT_2535 at 2567.560 kb on + strand, within EX28DRAFT_2535 at 2567.560 kb on + strand, within EX28DRAFT_2535 at 2567.787 kb on + strand, within EX28DRAFT_2535 at 2567.787 kb on + strand, within EX28DRAFT_2535 at 2567.812 kb on - strand, within EX28DRAFT_2535 at 2567.826 kb on + strand, within EX28DRAFT_2535 at 2567.876 kb on - strand, within EX28DRAFT_2535 at 2567.876 kb on - strand, within EX28DRAFT_2535 at 2567.955 kb on - strand, within EX28DRAFT_2535 at 2567.981 kb on - strand at 2568.046 kb on + strand at 2568.152 kb on + strand at 2568.152 kb on + strand at 2568.170 kb on + strand at 2568.171 kb on - strand at 2568.171 kb on - strand at 2568.233 kb on + strand at 2568.236 kb on - strand at 2568.300 kb on - strand at 2568.317 kb on + strand at 2568.318 kb on - strand at 2568.395 kb on + strand at 2568.396 kb on - strand at 2568.509 kb on - strand, within EX28DRAFT_2536 at 2568.510 kb on + strand, within EX28DRAFT_2536 at 2568.511 kb on - strand, within EX28DRAFT_2536 at 2568.514 kb on + strand, within EX28DRAFT_2536 at 2568.514 kb on + strand, within EX28DRAFT_2536 at 2568.515 kb on - strand, within EX28DRAFT_2536 at 2568.515 kb on - strand, within EX28DRAFT_2536 at 2568.567 kb on + strand, within EX28DRAFT_2536 at 2568.567 kb on + strand, within EX28DRAFT_2536 at 2568.567 kb on + strand, within EX28DRAFT_2536 at 2568.568 kb on - strand, within EX28DRAFT_2536 at 2568.568 kb on - strand, within EX28DRAFT_2536 at 2568.568 kb on - strand, within EX28DRAFT_2536 at 2568.661 kb on + strand, within EX28DRAFT_2536 at 2568.662 kb on - strand, within EX28DRAFT_2536 at 2568.669 kb on + strand, within EX28DRAFT_2536 at 2568.695 kb on + strand, within EX28DRAFT_2536 at 2568.696 kb on - strand, within EX28DRAFT_2536 at 2568.717 kb on - strand at 2568.728 kb on + strand at 2568.728 kb on + strand at 2568.728 kb on + strand at 2568.728 kb on + strand at 2568.729 kb on - strand at 2568.729 kb on - strand at 2568.730 kb on + strand at 2568.730 kb on + strand at 2568.731 kb on - strand at 2568.731 kb on - strand at 2568.731 kb on - strand at 2568.740 kb on + strand at 2568.741 kb on - strand at 2568.906 kb on + strand at 2568.961 kb on + strand at 2568.999 kb on + strand at 2569.000 kb on - strand at 2569.023 kb on + strand at 2569.024 kb on - strand at 2569.024 kb on - strand at 2569.025 kb on + strand at 2569.025 kb on + strand at 2569.025 kb on + strand at 2569.031 kb on + strand at 2569.498 kb on + strand, within EX28DRAFT_2537 at 2569.499 kb on - strand, within EX28DRAFT_2537 at 2569.499 kb on - strand, within EX28DRAFT_2537 at 2569.581 kb on + strand at 2569.654 kb on - strand at 2569.654 kb on - strand at 2569.654 kb on - strand at 2569.691 kb on + strand at 2569.691 kb on + strand at 2569.692 kb on - strand at 2569.692 kb on - strand at 2569.692 kb on - strand at 2569.695 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 2,567,522 - EX28DRAFT_2535 0.55 +0.4 2,567,560 + EX28DRAFT_2535 0.58 -0.8 2,567,560 + EX28DRAFT_2535 0.58 -0.2 2,567,787 + EX28DRAFT_2535 0.76 +1.2 2,567,787 + EX28DRAFT_2535 0.76 +1.7 2,567,812 - EX28DRAFT_2535 0.78 +0.3 2,567,826 + EX28DRAFT_2535 0.79 +0.2 2,567,876 - EX28DRAFT_2535 0.83 +0.3 2,567,876 - EX28DRAFT_2535 0.83 +0.8 2,567,955 - EX28DRAFT_2535 0.89 -0.2 2,567,981 - +0.0 2,568,046 + -0.9 2,568,152 + +3.2 2,568,152 + -0.3 2,568,170 + -0.2 2,568,171 - +1.2 2,568,171 - +0.4 2,568,233 + -0.9 2,568,236 - +0.3 2,568,300 - +0.2 2,568,317 + -0.3 2,568,318 - -0.1 2,568,395 + +0.8 2,568,396 - +0.1 2,568,509 - EX28DRAFT_2536 0.25 +0.7 2,568,510 + EX28DRAFT_2536 0.25 +1.1 2,568,511 - EX28DRAFT_2536 0.25 +0.7 2,568,514 + EX28DRAFT_2536 0.26 +0.7 2,568,514 + EX28DRAFT_2536 0.26 -2.3 2,568,515 - EX28DRAFT_2536 0.27 -0.2 2,568,515 - EX28DRAFT_2536 0.27 +0.7 2,568,567 + EX28DRAFT_2536 0.43 -0.6 2,568,567 + EX28DRAFT_2536 0.43 -0.1 2,568,567 + EX28DRAFT_2536 0.43 +0.0 2,568,568 - EX28DRAFT_2536 0.43 +0.2 2,568,568 - EX28DRAFT_2536 0.43 +0.2 2,568,568 - EX28DRAFT_2536 0.43 +0.0 2,568,661 + EX28DRAFT_2536 0.73 -0.5 2,568,662 - EX28DRAFT_2536 0.73 +0.1 2,568,669 + EX28DRAFT_2536 0.76 +1.0 2,568,695 + EX28DRAFT_2536 0.84 -0.4 2,568,696 - EX28DRAFT_2536 0.84 +0.2 2,568,717 - +0.0 2,568,728 + -1.0 2,568,728 + +0.8 2,568,728 + -0.6 2,568,728 + +0.1 2,568,729 - +0.3 2,568,729 - +1.4 2,568,730 + +0.8 2,568,730 + -0.8 2,568,731 - +0.7 2,568,731 - +0.2 2,568,731 - +0.3 2,568,740 + +0.2 2,568,741 - +1.6 2,568,906 + +0.5 2,568,961 + +0.3 2,568,999 + -0.3 2,569,000 - -0.3 2,569,023 + -0.4 2,569,024 - +1.2 2,569,024 - -2.5 2,569,025 + -0.2 2,569,025 + +0.9 2,569,025 + -0.4 2,569,031 + +0.3 2,569,498 + EX28DRAFT_2537 0.77 +0.2 2,569,499 - EX28DRAFT_2537 0.77 -0.4 2,569,499 - EX28DRAFT_2537 0.77 +0.2 2,569,581 + -0.4 2,569,654 - +0.7 2,569,654 - -0.8 2,569,654 - -0.3 2,569,691 + -0.3 2,569,691 + +0.1 2,569,692 - +0.8 2,569,692 - -0.9 2,569,692 - +0.3 2,569,695 + -0.4
Or see this region's nucleotide sequence