Strain Fitness in Enterobacter asburiae PDN3 around EX28DRAFT_2530
Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MS_media with m-arsenite 1 mM |
---|---|---|---|---|---|
remove | |||||
2,560,580 | - | EX28DRAFT_2529 | 0.62 | -0.4 | |
2,560,581 | + | EX28DRAFT_2529 | 0.62 | +0.0 | |
2,560,581 | + | EX28DRAFT_2529 | 0.62 | -1.6 | |
2,560,581 | + | EX28DRAFT_2529 | 0.62 | +0.8 | |
2,560,633 | - | EX28DRAFT_2529 | 0.65 | -0.6 | |
2,560,636 | - | EX28DRAFT_2529 | 0.65 | -0.2 | |
2,560,831 | - | EX28DRAFT_2529 | 0.76 | -2.5 | |
2,561,163 | + | -0.5 | |||
2,561,188 | - | -1.0 | |||
2,561,271 | - | -0.0 | |||
2,561,290 | - | +0.5 | |||
2,561,362 | - | -0.2 | |||
2,561,465 | + | -0.1 | |||
2,561,466 | - | -1.5 | |||
2,561,524 | - | +0.4 | |||
2,561,686 | + | EX28DRAFT_2530 | 0.69 | -2.7 | |
2,561,695 | + | EX28DRAFT_2530 | 0.73 | -1.5 | |
2,561,788 | - | -1.0 | |||
2,561,795 | - | -1.9 | |||
2,561,795 | - | -1.3 | |||
2,561,836 | + | -1.5 | |||
2,561,858 | + | -1.9 | |||
2,561,859 | - | -1.7 | |||
2,561,859 | - | -0.5 | |||
2,561,859 | - | -2.0 | |||
2,561,859 | - | -0.1 | |||
2,561,886 | - | -0.8 | |||
2,561,886 | - | -1.1 | |||
2,561,886 | - | -0.1 | |||
2,561,898 | - | -0.6 | |||
2,561,902 | + | -0.1 | |||
2,561,902 | + | +0.0 | |||
2,561,906 | + | +0.7 | |||
2,561,907 | - | -0.1 | |||
2,561,908 | + | -0.9 | |||
2,561,940 | + | -2.3 | |||
2,561,941 | - | -1.0 | |||
2,561,955 | + | -0.8 |
Or see this region's nucleotide sequence