Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2402 and EX28DRAFT_2403 are separated by 13 nucleotides EX28DRAFT_2403 and EX28DRAFT_2404 are separated by 105 nucleotides
EX28DRAFT_2402: EX28DRAFT_2402 - acetolactate synthase, large subunit (EC 2.2.1.6), at 2,427,399 to 2,429,078
_2402
EX28DRAFT_2403: EX28DRAFT_2403 - alpha-acetolactate decarboxylase, at 2,429,092 to 2,429,871
_2403
EX28DRAFT_2404: EX28DRAFT_2404 - Transcriptional regulator, at 2,429,977 to 2,430,858
_2404
Position (kb)
2429
2430 Strain fitness (log2 ratio)
-2
-1
0
1 at 2428.138 kb on + strand, within EX28DRAFT_2402 at 2428.138 kb on + strand, within EX28DRAFT_2402 at 2428.138 kb on + strand, within EX28DRAFT_2402 at 2428.139 kb on - strand, within EX28DRAFT_2402 at 2428.139 kb on - strand, within EX28DRAFT_2402 at 2428.139 kb on - strand, within EX28DRAFT_2402 at 2428.142 kb on + strand, within EX28DRAFT_2402 at 2428.142 kb on + strand, within EX28DRAFT_2402 at 2428.142 kb on + strand, within EX28DRAFT_2402 at 2428.142 kb on + strand, within EX28DRAFT_2402 at 2428.143 kb on - strand, within EX28DRAFT_2402 at 2428.245 kb on - strand, within EX28DRAFT_2402 at 2428.354 kb on + strand, within EX28DRAFT_2402 at 2428.355 kb on - strand, within EX28DRAFT_2402 at 2428.355 kb on - strand, within EX28DRAFT_2402 at 2428.440 kb on + strand, within EX28DRAFT_2402 at 2428.441 kb on - strand, within EX28DRAFT_2402 at 2428.441 kb on - strand, within EX28DRAFT_2402 at 2428.441 kb on - strand, within EX28DRAFT_2402 at 2428.569 kb on - strand, within EX28DRAFT_2402 at 2428.678 kb on + strand, within EX28DRAFT_2402 at 2428.679 kb on - strand, within EX28DRAFT_2402 at 2429.094 kb on - strand at 2429.640 kb on - strand, within EX28DRAFT_2403 at 2429.755 kb on + strand, within EX28DRAFT_2403 at 2429.770 kb on + strand, within EX28DRAFT_2403 at 2429.894 kb on - strand at 2429.945 kb on + strand at 2429.946 kb on - strand at 2429.972 kb on + strand at 2429.972 kb on + strand at 2429.972 kb on + strand at 2429.973 kb on - strand at 2430.121 kb on - strand, within EX28DRAFT_2404 at 2430.170 kb on - strand, within EX28DRAFT_2404 at 2430.363 kb on + strand, within EX28DRAFT_2404 at 2430.363 kb on + strand, within EX28DRAFT_2404 at 2430.364 kb on - strand, within EX28DRAFT_2404 at 2430.364 kb on - strand, within EX28DRAFT_2404 at 2430.776 kb on - strand at 2430.865 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 2,428,138 + EX28DRAFT_2402 0.44 +1.7 2,428,138 + EX28DRAFT_2402 0.44 -0.2 2,428,138 + EX28DRAFT_2402 0.44 -0.2 2,428,139 - EX28DRAFT_2402 0.44 +0.4 2,428,139 - EX28DRAFT_2402 0.44 +0.1 2,428,139 - EX28DRAFT_2402 0.44 +0.4 2,428,142 + EX28DRAFT_2402 0.44 +0.3 2,428,142 + EX28DRAFT_2402 0.44 -1.4 2,428,142 + EX28DRAFT_2402 0.44 -0.4 2,428,142 + EX28DRAFT_2402 0.44 -0.5 2,428,143 - EX28DRAFT_2402 0.44 +0.7 2,428,245 - EX28DRAFT_2402 0.50 +0.1 2,428,354 + EX28DRAFT_2402 0.57 +0.8 2,428,355 - EX28DRAFT_2402 0.57 -1.2 2,428,355 - EX28DRAFT_2402 0.57 -0.5 2,428,440 + EX28DRAFT_2402 0.62 +0.5 2,428,441 - EX28DRAFT_2402 0.62 +0.2 2,428,441 - EX28DRAFT_2402 0.62 -0.4 2,428,441 - EX28DRAFT_2402 0.62 -1.6 2,428,569 - EX28DRAFT_2402 0.70 -2.3 2,428,678 + EX28DRAFT_2402 0.76 +0.7 2,428,679 - EX28DRAFT_2402 0.76 +0.5 2,429,094 - +0.0 2,429,640 - EX28DRAFT_2403 0.70 +0.0 2,429,755 + EX28DRAFT_2403 0.85 -0.3 2,429,770 + EX28DRAFT_2403 0.87 -0.7 2,429,894 - -0.6 2,429,945 + -0.3 2,429,946 - -0.1 2,429,972 + +1.2 2,429,972 + +1.6 2,429,972 + +0.3 2,429,973 - -0.5 2,430,121 - EX28DRAFT_2404 0.16 -0.8 2,430,170 - EX28DRAFT_2404 0.22 +1.7 2,430,363 + EX28DRAFT_2404 0.44 +0.1 2,430,363 + EX28DRAFT_2404 0.44 +0.2 2,430,364 - EX28DRAFT_2404 0.44 +0.1 2,430,364 - EX28DRAFT_2404 0.44 -0.4 2,430,776 - +0.3 2,430,865 + +0.0
Or see this region's nucleotide sequence