Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2365 and EX28DRAFT_2366 are separated by 183 nucleotides EX28DRAFT_2366 and EX28DRAFT_2367 overlap by 29 nucleotides EX28DRAFT_2367 and EX28DRAFT_2368 overlap by 4 nucleotides EX28DRAFT_2368 and EX28DRAFT_2369 are separated by 96 nucleotides
EX28DRAFT_2365: EX28DRAFT_2365 - Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 2,386,377 to 2,387,120
_2365
EX28DRAFT_2366: EX28DRAFT_2366 - Cytotoxic translational repressor of toxin-antitoxin stability system, at 2,387,304 to 2,387,609
_2366
EX28DRAFT_2367: EX28DRAFT_2367 - Helix-turn-helix, at 2,387,581 to 2,387,985
_2367
EX28DRAFT_2368: EX28DRAFT_2368 - Uncharacterized small protein, at 2,387,982 to 2,388,179
_2368
EX28DRAFT_2369: EX28DRAFT_2369 - Carbon starvation protein, predicted membrane protein, at 2,388,276 to 2,390,381
_2369
Position (kb)
2387
2388
2389 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2387.219 kb on + strand at 2387.219 kb on + strand at 2387.252 kb on - strand at 2387.261 kb on - strand at 2387.263 kb on + strand at 2387.264 kb on - strand at 2387.288 kb on + strand at 2387.288 kb on + strand at 2387.300 kb on - strand at 2387.487 kb on + strand, within EX28DRAFT_2366 at 2387.489 kb on + strand, within EX28DRAFT_2366 at 2387.489 kb on + strand, within EX28DRAFT_2366 at 2387.490 kb on - strand, within EX28DRAFT_2366 at 2387.580 kb on + strand at 2387.581 kb on - strand at 2387.588 kb on + strand at 2387.588 kb on + strand at 2387.589 kb on - strand at 2387.595 kb on - strand at 2387.623 kb on + strand, within EX28DRAFT_2367 at 2387.623 kb on + strand, within EX28DRAFT_2367 at 2387.624 kb on - strand, within EX28DRAFT_2367 at 2387.624 kb on - strand, within EX28DRAFT_2367 at 2387.624 kb on - strand, within EX28DRAFT_2367 at 2387.655 kb on + strand, within EX28DRAFT_2367 at 2387.655 kb on + strand, within EX28DRAFT_2367 at 2387.663 kb on + strand, within EX28DRAFT_2367 at 2387.663 kb on + strand, within EX28DRAFT_2367 at 2387.727 kb on + strand, within EX28DRAFT_2367 at 2387.759 kb on + strand, within EX28DRAFT_2367 at 2387.759 kb on + strand, within EX28DRAFT_2367 at 2387.760 kb on - strand, within EX28DRAFT_2367 at 2387.760 kb on - strand, within EX28DRAFT_2367 at 2387.760 kb on - strand, within EX28DRAFT_2367 at 2387.837 kb on + strand, within EX28DRAFT_2367 at 2387.936 kb on - strand, within EX28DRAFT_2367 at 2388.049 kb on + strand, within EX28DRAFT_2368 at 2388.049 kb on + strand, within EX28DRAFT_2368 at 2388.086 kb on + strand, within EX28DRAFT_2368 at 2388.086 kb on + strand, within EX28DRAFT_2368 at 2388.087 kb on - strand, within EX28DRAFT_2368 at 2388.097 kb on + strand, within EX28DRAFT_2368 at 2388.097 kb on + strand, within EX28DRAFT_2368 at 2388.106 kb on + strand, within EX28DRAFT_2368 at 2388.149 kb on - strand, within EX28DRAFT_2368 at 2388.151 kb on + strand, within EX28DRAFT_2368 at 2388.152 kb on + strand, within EX28DRAFT_2368 at 2388.152 kb on + strand, within EX28DRAFT_2368 at 2388.153 kb on - strand, within EX28DRAFT_2368 at 2388.153 kb on - strand, within EX28DRAFT_2368 at 2388.153 kb on - strand, within EX28DRAFT_2368 at 2388.179 kb on + strand at 2388.397 kb on + strand at 2388.397 kb on + strand at 2388.397 kb on + strand at 2388.398 kb on - strand at 2388.425 kb on + strand at 2388.425 kb on + strand at 2388.426 kb on - strand at 2388.426 kb on - strand at 2388.434 kb on + strand at 2388.435 kb on - strand at 2388.435 kb on - strand at 2388.750 kb on - strand, within EX28DRAFT_2369 at 2388.894 kb on - strand, within EX28DRAFT_2369 at 2388.894 kb on - strand, within EX28DRAFT_2369 at 2388.894 kb on - strand, within EX28DRAFT_2369 at 2389.013 kb on + strand, within EX28DRAFT_2369 at 2389.014 kb on - strand, within EX28DRAFT_2369 at 2389.015 kb on + strand, within EX28DRAFT_2369 at 2389.015 kb on + strand, within EX28DRAFT_2369 at 2389.016 kb on - strand, within EX28DRAFT_2369 at 2389.016 kb on - strand, within EX28DRAFT_2369 at 2389.016 kb on - strand, within EX28DRAFT_2369 at 2389.062 kb on - strand, within EX28DRAFT_2369 at 2389.103 kb on + strand, within EX28DRAFT_2369 at 2389.104 kb on - strand, within EX28DRAFT_2369
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 2,387,219 + -0.2 2,387,219 + -0.4 2,387,252 - +0.3 2,387,261 - +0.1 2,387,263 + -0.5 2,387,264 - +0.2 2,387,288 + -0.2 2,387,288 + -0.1 2,387,300 - +0.3 2,387,487 + EX28DRAFT_2366 0.60 -1.5 2,387,489 + EX28DRAFT_2366 0.60 +0.8 2,387,489 + EX28DRAFT_2366 0.60 +0.1 2,387,490 - EX28DRAFT_2366 0.61 +0.1 2,387,580 + -0.6 2,387,581 - -1.0 2,387,588 + -1.1 2,387,588 + -1.4 2,387,589 - -0.8 2,387,595 - +0.6 2,387,623 + EX28DRAFT_2367 0.10 -0.4 2,387,623 + EX28DRAFT_2367 0.10 +1.7 2,387,624 - EX28DRAFT_2367 0.11 +0.1 2,387,624 - EX28DRAFT_2367 0.11 +1.1 2,387,624 - EX28DRAFT_2367 0.11 +0.6 2,387,655 + EX28DRAFT_2367 0.18 +0.3 2,387,655 + EX28DRAFT_2367 0.18 +0.1 2,387,663 + EX28DRAFT_2367 0.20 +0.9 2,387,663 + EX28DRAFT_2367 0.20 +0.3 2,387,727 + EX28DRAFT_2367 0.36 +0.3 2,387,759 + EX28DRAFT_2367 0.44 -1.4 2,387,759 + EX28DRAFT_2367 0.44 +0.2 2,387,760 - EX28DRAFT_2367 0.44 +0.4 2,387,760 - EX28DRAFT_2367 0.44 -0.9 2,387,760 - EX28DRAFT_2367 0.44 -0.1 2,387,837 + EX28DRAFT_2367 0.63 +0.3 2,387,936 - EX28DRAFT_2367 0.88 +0.1 2,388,049 + EX28DRAFT_2368 0.34 -0.6 2,388,049 + EX28DRAFT_2368 0.34 +0.1 2,388,086 + EX28DRAFT_2368 0.53 +0.1 2,388,086 + EX28DRAFT_2368 0.53 +1.2 2,388,087 - EX28DRAFT_2368 0.53 +0.1 2,388,097 + EX28DRAFT_2368 0.58 +1.8 2,388,097 + EX28DRAFT_2368 0.58 +1.3 2,388,106 + EX28DRAFT_2368 0.63 +0.2 2,388,149 - EX28DRAFT_2368 0.84 -1.2 2,388,151 + EX28DRAFT_2368 0.85 +0.5 2,388,152 + EX28DRAFT_2368 0.86 -2.4 2,388,152 + EX28DRAFT_2368 0.86 +2.0 2,388,153 - EX28DRAFT_2368 0.86 +0.2 2,388,153 - EX28DRAFT_2368 0.86 -0.2 2,388,153 - EX28DRAFT_2368 0.86 +0.3 2,388,179 + +0.8 2,388,397 + +0.3 2,388,397 + +0.0 2,388,397 + +0.7 2,388,398 - -0.5 2,388,425 + +0.3 2,388,425 + -0.2 2,388,426 - +1.2 2,388,426 - +0.3 2,388,434 + +0.1 2,388,435 - +0.4 2,388,435 - +0.3 2,388,750 - EX28DRAFT_2369 0.23 +0.5 2,388,894 - EX28DRAFT_2369 0.29 -0.2 2,388,894 - EX28DRAFT_2369 0.29 +0.6 2,388,894 - EX28DRAFT_2369 0.29 -0.5 2,389,013 + EX28DRAFT_2369 0.35 +0.7 2,389,014 - EX28DRAFT_2369 0.35 -0.1 2,389,015 + EX28DRAFT_2369 0.35 -1.2 2,389,015 + EX28DRAFT_2369 0.35 -1.9 2,389,016 - EX28DRAFT_2369 0.35 +0.6 2,389,016 - EX28DRAFT_2369 0.35 +0.0 2,389,016 - EX28DRAFT_2369 0.35 +1.7 2,389,062 - EX28DRAFT_2369 0.37 +0.1 2,389,103 + EX28DRAFT_2369 0.39 -1.4 2,389,104 - EX28DRAFT_2369 0.39 +0.8
Or see this region's nucleotide sequence