Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2351 and EX28DRAFT_2352 are separated by 117 nucleotides EX28DRAFT_2352 and EX28DRAFT_2353 are separated by 0 nucleotides
EX28DRAFT_2351: EX28DRAFT_2351 - Transcriptional regulator, at 2,372,914 to 2,373,813
_2351
EX28DRAFT_2352: EX28DRAFT_2352 - hypothetical protein, at 2,373,931 to 2,374,083
_2352
EX28DRAFT_2353: EX28DRAFT_2353 - Aspartate/tyrosine/aromatic aminotransferase, at 2,374,084 to 2,375,244
_2353
Position (kb)
2373
2374
2375 Strain fitness (log2 ratio)
-1
0
1 at 2373.016 kb on + strand, within EX28DRAFT_2351 at 2373.017 kb on - strand, within EX28DRAFT_2351 at 2373.017 kb on - strand, within EX28DRAFT_2351 at 2373.017 kb on - strand, within EX28DRAFT_2351 at 2373.097 kb on - strand, within EX28DRAFT_2351 at 2373.181 kb on - strand, within EX28DRAFT_2351 at 2373.181 kb on - strand, within EX28DRAFT_2351 at 2373.235 kb on - strand, within EX28DRAFT_2351 at 2373.369 kb on - strand, within EX28DRAFT_2351 at 2373.388 kb on - strand, within EX28DRAFT_2351 at 2373.420 kb on + strand, within EX28DRAFT_2351 at 2373.421 kb on - strand, within EX28DRAFT_2351 at 2373.421 kb on - strand, within EX28DRAFT_2351 at 2373.583 kb on - strand, within EX28DRAFT_2351 at 2373.594 kb on + strand, within EX28DRAFT_2351 at 2373.607 kb on - strand, within EX28DRAFT_2351 at 2373.735 kb on + strand at 2373.740 kb on - strand at 2373.749 kb on - strand at 2373.890 kb on - strand at 2373.899 kb on + strand at 2373.900 kb on - strand at 2373.930 kb on + strand at 2373.949 kb on + strand, within EX28DRAFT_2352 at 2373.950 kb on - strand, within EX28DRAFT_2352 at 2373.953 kb on + strand, within EX28DRAFT_2352 at 2374.081 kb on + strand at 2374.159 kb on - strand at 2374.287 kb on - strand, within EX28DRAFT_2353 at 2374.287 kb on - strand, within EX28DRAFT_2353 at 2374.361 kb on + strand, within EX28DRAFT_2353 at 2374.362 kb on - strand, within EX28DRAFT_2353 at 2374.532 kb on + strand, within EX28DRAFT_2353 at 2374.532 kb on + strand, within EX28DRAFT_2353 at 2374.653 kb on - strand, within EX28DRAFT_2353 at 2374.862 kb on + strand, within EX28DRAFT_2353 at 2374.863 kb on - strand, within EX28DRAFT_2353 at 2374.871 kb on + strand, within EX28DRAFT_2353 at 2374.932 kb on - strand, within EX28DRAFT_2353 at 2374.962 kb on + strand, within EX28DRAFT_2353 at 2374.963 kb on - strand, within EX28DRAFT_2353
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 2,373,016 + EX28DRAFT_2351 0.11 -0.5 2,373,017 - EX28DRAFT_2351 0.11 -0.3 2,373,017 - EX28DRAFT_2351 0.11 -0.2 2,373,017 - EX28DRAFT_2351 0.11 +0.4 2,373,097 - EX28DRAFT_2351 0.20 -0.9 2,373,181 - EX28DRAFT_2351 0.30 +0.1 2,373,181 - EX28DRAFT_2351 0.30 -0.4 2,373,235 - EX28DRAFT_2351 0.36 +1.4 2,373,369 - EX28DRAFT_2351 0.51 +0.1 2,373,388 - EX28DRAFT_2351 0.53 +0.4 2,373,420 + EX28DRAFT_2351 0.56 -0.5 2,373,421 - EX28DRAFT_2351 0.56 +0.4 2,373,421 - EX28DRAFT_2351 0.56 +0.8 2,373,583 - EX28DRAFT_2351 0.74 +0.1 2,373,594 + EX28DRAFT_2351 0.76 -0.3 2,373,607 - EX28DRAFT_2351 0.77 -0.8 2,373,735 + -0.3 2,373,740 - -0.1 2,373,749 - -0.3 2,373,890 - +0.3 2,373,899 + -0.7 2,373,900 - +0.5 2,373,930 + -1.7 2,373,949 + EX28DRAFT_2352 0.12 -0.3 2,373,950 - EX28DRAFT_2352 0.12 -0.1 2,373,953 + EX28DRAFT_2352 0.14 -1.3 2,374,081 + +1.1 2,374,159 - +1.4 2,374,287 - EX28DRAFT_2353 0.17 +0.3 2,374,287 - EX28DRAFT_2353 0.17 +0.8 2,374,361 + EX28DRAFT_2353 0.24 +0.6 2,374,362 - EX28DRAFT_2353 0.24 +0.8 2,374,532 + EX28DRAFT_2353 0.39 +0.5 2,374,532 + EX28DRAFT_2353 0.39 +0.1 2,374,653 - EX28DRAFT_2353 0.49 -0.4 2,374,862 + EX28DRAFT_2353 0.67 -0.3 2,374,863 - EX28DRAFT_2353 0.67 +0.6 2,374,871 + EX28DRAFT_2353 0.68 -1.7 2,374,932 - EX28DRAFT_2353 0.73 -1.3 2,374,962 + EX28DRAFT_2353 0.76 -0.4 2,374,963 - EX28DRAFT_2353 0.76 +0.1
Or see this region's nucleotide sequence