Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2349 and EX28DRAFT_2350 are separated by 128 nucleotides EX28DRAFT_2350 and EX28DRAFT_2351 are separated by 623 nucleotides
EX28DRAFT_2349: EX28DRAFT_2349 - alkyl hydroperoxide reductase subunit F, at 2,370,033 to 2,371,598
_2349
EX28DRAFT_2350: EX28DRAFT_2350 - peroxiredoxin, at 2,371,727 to 2,372,290
_2350
EX28DRAFT_2351: EX28DRAFT_2351 - Transcriptional regulator, at 2,372,914 to 2,373,813
_2351
Position (kb)
2371
2372
2373 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2371.075 kb on + strand, within EX28DRAFT_2349 at 2371.075 kb on + strand, within EX28DRAFT_2349 at 2371.076 kb on - strand, within EX28DRAFT_2349 at 2371.225 kb on + strand, within EX28DRAFT_2349 at 2371.228 kb on + strand, within EX28DRAFT_2349 at 2371.228 kb on + strand, within EX28DRAFT_2349 at 2371.228 kb on + strand, within EX28DRAFT_2349 at 2371.415 kb on + strand, within EX28DRAFT_2349 at 2371.561 kb on + strand at 2371.583 kb on + strand at 2371.584 kb on - strand at 2371.584 kb on - strand at 2371.586 kb on + strand at 2371.587 kb on - strand at 2371.642 kb on - strand at 2371.642 kb on - strand at 2371.642 kb on - strand at 2371.681 kb on + strand at 2371.682 kb on - strand at 2371.749 kb on - strand at 2371.749 kb on - strand at 2371.749 kb on - strand at 2371.796 kb on + strand, within EX28DRAFT_2350 at 2371.796 kb on + strand, within EX28DRAFT_2350 at 2371.821 kb on + strand, within EX28DRAFT_2350 at 2371.840 kb on + strand, within EX28DRAFT_2350 at 2371.871 kb on - strand, within EX28DRAFT_2350 at 2372.011 kb on - strand, within EX28DRAFT_2350 at 2372.119 kb on - strand, within EX28DRAFT_2350 at 2372.119 kb on - strand, within EX28DRAFT_2350 at 2372.161 kb on + strand, within EX28DRAFT_2350 at 2372.162 kb on - strand, within EX28DRAFT_2350 at 2372.295 kb on - strand at 2372.295 kb on - strand at 2372.321 kb on + strand at 2372.321 kb on + strand at 2372.322 kb on - strand at 2372.322 kb on - strand at 2372.322 kb on - strand at 2372.322 kb on - strand at 2372.356 kb on + strand at 2372.486 kb on + strand at 2372.487 kb on - strand at 2372.526 kb on + strand at 2372.527 kb on - strand at 2372.536 kb on + strand at 2372.538 kb on + strand at 2372.538 kb on + strand at 2372.565 kb on - strand at 2372.626 kb on - strand at 2372.631 kb on - strand at 2372.631 kb on - strand at 2372.859 kb on + strand at 2373.016 kb on + strand, within EX28DRAFT_2351 at 2373.017 kb on - strand, within EX28DRAFT_2351 at 2373.017 kb on - strand, within EX28DRAFT_2351 at 2373.017 kb on - strand, within EX28DRAFT_2351 at 2373.097 kb on - strand, within EX28DRAFT_2351 at 2373.181 kb on - strand, within EX28DRAFT_2351 at 2373.181 kb on - strand, within EX28DRAFT_2351 at 2373.235 kb on - strand, within EX28DRAFT_2351
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 2,371,075 + EX28DRAFT_2349 0.67 +0.0 2,371,075 + EX28DRAFT_2349 0.67 -1.1 2,371,076 - EX28DRAFT_2349 0.67 +0.0 2,371,225 + EX28DRAFT_2349 0.76 +1.2 2,371,228 + EX28DRAFT_2349 0.76 -1.3 2,371,228 + EX28DRAFT_2349 0.76 -1.0 2,371,228 + EX28DRAFT_2349 0.76 +0.7 2,371,415 + EX28DRAFT_2349 0.88 -1.1 2,371,561 + -0.9 2,371,583 + -0.6 2,371,584 - -0.2 2,371,584 - -0.4 2,371,586 + -0.1 2,371,587 - -0.3 2,371,642 - +2.3 2,371,642 - +0.0 2,371,642 - -0.2 2,371,681 + -0.4 2,371,682 - +1.1 2,371,749 - +0.4 2,371,749 - -0.1 2,371,749 - -0.2 2,371,796 + EX28DRAFT_2350 0.12 -1.0 2,371,796 + EX28DRAFT_2350 0.12 +1.6 2,371,821 + EX28DRAFT_2350 0.17 -0.1 2,371,840 + EX28DRAFT_2350 0.20 -0.6 2,371,871 - EX28DRAFT_2350 0.26 -0.4 2,372,011 - EX28DRAFT_2350 0.50 -0.0 2,372,119 - EX28DRAFT_2350 0.70 -0.1 2,372,119 - EX28DRAFT_2350 0.70 -0.5 2,372,161 + EX28DRAFT_2350 0.77 -0.5 2,372,162 - EX28DRAFT_2350 0.77 -0.3 2,372,295 - +1.0 2,372,295 - +0.4 2,372,321 + -0.0 2,372,321 + -2.2 2,372,322 - +0.2 2,372,322 - +0.9 2,372,322 - +0.6 2,372,322 - +0.6 2,372,356 + +0.5 2,372,486 + -0.5 2,372,487 - -0.2 2,372,526 + -0.6 2,372,527 - -2.3 2,372,536 + -3.9 2,372,538 + +1.1 2,372,538 + -0.8 2,372,565 - +1.8 2,372,626 - -0.3 2,372,631 - +0.5 2,372,631 - +0.4 2,372,859 + +0.9 2,373,016 + EX28DRAFT_2351 0.11 -0.5 2,373,017 - EX28DRAFT_2351 0.11 -0.3 2,373,017 - EX28DRAFT_2351 0.11 -0.2 2,373,017 - EX28DRAFT_2351 0.11 +0.4 2,373,097 - EX28DRAFT_2351 0.20 -0.9 2,373,181 - EX28DRAFT_2351 0.30 +0.1 2,373,181 - EX28DRAFT_2351 0.30 -0.4 2,373,235 - EX28DRAFT_2351 0.36 +1.4
Or see this region's nucleotide sequence