Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2142 and EX28DRAFT_2143 are separated by 149 nucleotides EX28DRAFT_2143 and EX28DRAFT_2144 overlap by 4 nucleotides
EX28DRAFT_2142: EX28DRAFT_2142 - HAD-superfamily hydrolase, subfamily IIB, at 2,163,591 to 2,164,406
_2142
EX28DRAFT_2143: EX28DRAFT_2143 - Protein of unknown function (DUF1479), at 2,164,556 to 2,165,812
_2143
EX28DRAFT_2144: EX28DRAFT_2144 - Transcriptional regulators, at 2,165,809 to 2,166,882
_2144
Position (kb)
2164
2165
2166 Strain fitness (log2 ratio)
-2
-1
0
1 at 2163.591 kb on - strand at 2163.591 kb on - strand at 2163.735 kb on + strand, within EX28DRAFT_2142 at 2163.735 kb on + strand, within EX28DRAFT_2142 at 2163.735 kb on + strand, within EX28DRAFT_2142 at 2163.979 kb on - strand, within EX28DRAFT_2142 at 2164.032 kb on - strand, within EX28DRAFT_2142 at 2164.032 kb on - strand, within EX28DRAFT_2142 at 2164.555 kb on + strand at 2164.556 kb on - strand at 2164.612 kb on - strand at 2164.661 kb on - strand at 2164.708 kb on + strand, within EX28DRAFT_2143 at 2164.768 kb on + strand, within EX28DRAFT_2143 at 2164.772 kb on - strand, within EX28DRAFT_2143 at 2164.905 kb on - strand, within EX28DRAFT_2143 at 2164.970 kb on + strand, within EX28DRAFT_2143 at 2165.100 kb on - strand, within EX28DRAFT_2143 at 2165.199 kb on - strand, within EX28DRAFT_2143 at 2165.244 kb on - strand, within EX28DRAFT_2143 at 2165.286 kb on - strand, within EX28DRAFT_2143 at 2165.286 kb on - strand, within EX28DRAFT_2143 at 2165.382 kb on + strand, within EX28DRAFT_2143 at 2165.382 kb on + strand, within EX28DRAFT_2143 at 2165.408 kb on + strand, within EX28DRAFT_2143 at 2165.409 kb on - strand, within EX28DRAFT_2143 at 2165.409 kb on - strand, within EX28DRAFT_2143 at 2165.630 kb on + strand, within EX28DRAFT_2143 at 2165.631 kb on - strand, within EX28DRAFT_2143 at 2165.631 kb on - strand, within EX28DRAFT_2143 at 2165.631 kb on - strand, within EX28DRAFT_2143 at 2165.736 kb on - strand at 2165.810 kb on + strand at 2165.810 kb on + strand at 2165.819 kb on + strand at 2165.820 kb on - strand at 2165.863 kb on + strand at 2165.955 kb on + strand, within EX28DRAFT_2144 at 2165.957 kb on + strand, within EX28DRAFT_2144 at 2165.957 kb on + strand, within EX28DRAFT_2144 at 2165.957 kb on + strand, within EX28DRAFT_2144 at 2166.148 kb on + strand, within EX28DRAFT_2144 at 2166.439 kb on - strand, within EX28DRAFT_2144 at 2166.439 kb on - strand, within EX28DRAFT_2144 at 2166.705 kb on + strand, within EX28DRAFT_2144 at 2166.705 kb on + strand, within EX28DRAFT_2144
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 2,163,591 - -1.5 2,163,591 - -0.3 2,163,735 + EX28DRAFT_2142 0.18 -0.4 2,163,735 + EX28DRAFT_2142 0.18 -0.2 2,163,735 + EX28DRAFT_2142 0.18 -1.7 2,163,979 - EX28DRAFT_2142 0.48 -0.2 2,164,032 - EX28DRAFT_2142 0.54 +1.2 2,164,032 - EX28DRAFT_2142 0.54 -0.1 2,164,555 + +0.4 2,164,556 - -1.0 2,164,612 - -0.0 2,164,661 - +0.1 2,164,708 + EX28DRAFT_2143 0.12 +0.4 2,164,768 + EX28DRAFT_2143 0.17 +0.1 2,164,772 - EX28DRAFT_2143 0.17 -0.2 2,164,905 - EX28DRAFT_2143 0.28 -0.1 2,164,970 + EX28DRAFT_2143 0.33 +0.1 2,165,100 - EX28DRAFT_2143 0.43 -0.4 2,165,199 - EX28DRAFT_2143 0.51 -0.5 2,165,244 - EX28DRAFT_2143 0.55 +0.2 2,165,286 - EX28DRAFT_2143 0.58 +0.3 2,165,286 - EX28DRAFT_2143 0.58 +1.0 2,165,382 + EX28DRAFT_2143 0.66 +0.8 2,165,382 + EX28DRAFT_2143 0.66 +0.1 2,165,408 + EX28DRAFT_2143 0.68 +0.4 2,165,409 - EX28DRAFT_2143 0.68 +0.2 2,165,409 - EX28DRAFT_2143 0.68 +0.0 2,165,630 + EX28DRAFT_2143 0.85 +0.8 2,165,631 - EX28DRAFT_2143 0.86 +0.1 2,165,631 - EX28DRAFT_2143 0.86 -0.3 2,165,631 - EX28DRAFT_2143 0.86 +0.1 2,165,736 - -0.5 2,165,810 + +0.3 2,165,810 + -0.0 2,165,819 + -0.3 2,165,820 - +0.6 2,165,863 + -0.8 2,165,955 + EX28DRAFT_2144 0.14 +0.2 2,165,957 + EX28DRAFT_2144 0.14 +0.1 2,165,957 + EX28DRAFT_2144 0.14 -2.2 2,165,957 + EX28DRAFT_2144 0.14 -0.5 2,166,148 + EX28DRAFT_2144 0.32 -0.8 2,166,439 - EX28DRAFT_2144 0.59 +0.3 2,166,439 - EX28DRAFT_2144 0.59 -0.0 2,166,705 + EX28DRAFT_2144 0.83 -0.6 2,166,705 + EX28DRAFT_2144 0.83 -0.0
Or see this region's nucleotide sequence