Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2138 and EX28DRAFT_2139 are separated by 89 nucleotides EX28DRAFT_2139 and EX28DRAFT_2140 are separated by 128 nucleotides EX28DRAFT_2140 and EX28DRAFT_2141 are separated by 4 nucleotides
EX28DRAFT_2138: EX28DRAFT_2138 - molybdopterin synthase sulfurylase MoeB, at 2,158,429 to 2,159,181
_2138
EX28DRAFT_2139: EX28DRAFT_2139 - fructose-6-phosphate aldolase, TalC/MipB family, at 2,159,271 to 2,159,933
_2139
EX28DRAFT_2140: EX28DRAFT_2140 - glycyl-radical enzyme activating protein, at 2,160,062 to 2,160,961
_2140
EX28DRAFT_2141: EX28DRAFT_2141 - glycyl radical enzyme, PFL2/glycerol dehydratase family, at 2,160,966 to 2,163,398
_2141
Position (kb)
2160
2161 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2159.075 kb on - strand, within EX28DRAFT_2138 at 2159.107 kb on + strand at 2159.107 kb on + strand at 2159.107 kb on + strand at 2159.107 kb on + strand at 2159.107 kb on + strand at 2159.107 kb on + strand at 2159.107 kb on + strand at 2159.107 kb on + strand at 2159.108 kb on - strand at 2159.108 kb on - strand at 2159.348 kb on + strand, within EX28DRAFT_2139 at 2159.351 kb on + strand, within EX28DRAFT_2139 at 2159.384 kb on + strand, within EX28DRAFT_2139 at 2159.487 kb on + strand, within EX28DRAFT_2139 at 2159.542 kb on + strand, within EX28DRAFT_2139 at 2159.554 kb on + strand, within EX28DRAFT_2139 at 2159.554 kb on + strand, within EX28DRAFT_2139 at 2159.554 kb on + strand, within EX28DRAFT_2139 at 2159.555 kb on - strand, within EX28DRAFT_2139 at 2159.555 kb on - strand, within EX28DRAFT_2139 at 2159.555 kb on - strand, within EX28DRAFT_2139 at 2159.555 kb on - strand, within EX28DRAFT_2139 at 2159.555 kb on - strand, within EX28DRAFT_2139 at 2159.555 kb on - strand, within EX28DRAFT_2139 at 2159.714 kb on + strand, within EX28DRAFT_2139 at 2159.879 kb on + strand at 2159.880 kb on - strand at 2159.923 kb on + strand at 2159.952 kb on - strand at 2159.963 kb on - strand at 2160.419 kb on + strand, within EX28DRAFT_2140 at 2160.465 kb on - strand, within EX28DRAFT_2140 at 2160.465 kb on - strand, within EX28DRAFT_2140 at 2160.465 kb on - strand, within EX28DRAFT_2140 at 2160.466 kb on + strand, within EX28DRAFT_2140 at 2160.467 kb on - strand, within EX28DRAFT_2140 at 2160.560 kb on + strand, within EX28DRAFT_2140 at 2160.560 kb on + strand, within EX28DRAFT_2140 at 2160.561 kb on - strand, within EX28DRAFT_2140 at 2160.577 kb on - strand, within EX28DRAFT_2140 at 2160.766 kb on + strand, within EX28DRAFT_2140 at 2160.803 kb on - strand, within EX28DRAFT_2140 at 2160.842 kb on + strand, within EX28DRAFT_2140 at 2160.843 kb on - strand, within EX28DRAFT_2140 at 2160.864 kb on - strand, within EX28DRAFT_2140 at 2160.921 kb on - strand at 2161.004 kb on + strand at 2161.005 kb on - strand at 2161.071 kb on + strand at 2161.071 kb on + strand at 2161.083 kb on + strand at 2161.234 kb on - strand, within EX28DRAFT_2141 at 2161.771 kb on - strand, within EX28DRAFT_2141 at 2161.840 kb on - strand, within EX28DRAFT_2141 at 2161.855 kb on - strand, within EX28DRAFT_2141
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 2,159,075 - EX28DRAFT_2138 0.86 +0.7 2,159,107 + +0.8 2,159,107 + -0.0 2,159,107 + +0.3 2,159,107 + -1.6 2,159,107 + +0.8 2,159,107 + +0.9 2,159,107 + +0.8 2,159,107 + +0.7 2,159,108 - +0.7 2,159,108 - +0.5 2,159,348 + EX28DRAFT_2139 0.12 -0.3 2,159,351 + EX28DRAFT_2139 0.12 +1.5 2,159,384 + EX28DRAFT_2139 0.17 -0.2 2,159,487 + EX28DRAFT_2139 0.33 +0.3 2,159,542 + EX28DRAFT_2139 0.41 -0.4 2,159,554 + EX28DRAFT_2139 0.43 -0.6 2,159,554 + EX28DRAFT_2139 0.43 -0.4 2,159,554 + EX28DRAFT_2139 0.43 +0.8 2,159,555 - EX28DRAFT_2139 0.43 +0.9 2,159,555 - EX28DRAFT_2139 0.43 -0.2 2,159,555 - EX28DRAFT_2139 0.43 +0.7 2,159,555 - EX28DRAFT_2139 0.43 -0.0 2,159,555 - EX28DRAFT_2139 0.43 -0.9 2,159,555 - EX28DRAFT_2139 0.43 +0.3 2,159,714 + EX28DRAFT_2139 0.67 -0.8 2,159,879 + +1.9 2,159,880 - +0.2 2,159,923 + +1.4 2,159,952 - +0.2 2,159,963 - -2.1 2,160,419 + EX28DRAFT_2140 0.40 +2.2 2,160,465 - EX28DRAFT_2140 0.45 -0.9 2,160,465 - EX28DRAFT_2140 0.45 +0.2 2,160,465 - EX28DRAFT_2140 0.45 -1.3 2,160,466 + EX28DRAFT_2140 0.45 +0.1 2,160,467 - EX28DRAFT_2140 0.45 -0.2 2,160,560 + EX28DRAFT_2140 0.55 +0.0 2,160,560 + EX28DRAFT_2140 0.55 +0.1 2,160,561 - EX28DRAFT_2140 0.55 -0.3 2,160,577 - EX28DRAFT_2140 0.57 -0.3 2,160,766 + EX28DRAFT_2140 0.78 -0.1 2,160,803 - EX28DRAFT_2140 0.82 -1.8 2,160,842 + EX28DRAFT_2140 0.87 +0.0 2,160,843 - EX28DRAFT_2140 0.87 +0.3 2,160,864 - EX28DRAFT_2140 0.89 +1.4 2,160,921 - -0.1 2,161,004 + +1.0 2,161,005 - -0.0 2,161,071 + +0.0 2,161,071 + +0.3 2,161,083 + -1.6 2,161,234 - EX28DRAFT_2141 0.11 -0.3 2,161,771 - EX28DRAFT_2141 0.33 +0.3 2,161,840 - EX28DRAFT_2141 0.36 -0.3 2,161,855 - EX28DRAFT_2141 0.37 -0.2
Or see this region's nucleotide sequence