Strain Fitness in Enterobacter asburiae PDN3 around EX28DRAFT_1519
Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MS_media with m-arsenite 1 mM |
---|---|---|---|---|---|
remove | |||||
1,531,630 | + | EX28DRAFT_1518 | 0.39 | -1.3 | |
1,531,631 | - | EX28DRAFT_1518 | 0.39 | -0.5 | |
1,531,631 | - | EX28DRAFT_1518 | 0.39 | -0.8 | |
1,531,750 | - | EX28DRAFT_1518 | 0.49 | +0.0 | |
1,532,090 | + | EX28DRAFT_1518 | 0.77 | -0.5 | |
1,532,317 | - | +0.6 | |||
1,532,317 | - | +0.4 | |||
1,532,406 | + | -0.1 | |||
1,532,425 | - | -0.2 | |||
1,532,437 | + | +0.5 | |||
1,532,482 | + | -0.8 | |||
1,532,482 | + | -2.7 | |||
1,532,483 | - | +2.0 | |||
1,532,483 | - | -1.8 | |||
1,532,486 | + | +0.5 | |||
1,532,486 | + | -0.2 | |||
1,532,487 | - | -0.5 | |||
1,532,487 | - | -0.2 | |||
1,532,615 | + | EX28DRAFT_1519 | 0.15 | +0.2 | |
1,532,616 | - | EX28DRAFT_1519 | 0.15 | -0.2 | |
1,533,421 | + | EX28DRAFT_1519 | 0.86 | +0.7 | |
1,533,467 | + | EX28DRAFT_1519 | 0.90 | -0.3 | |
1,533,468 | - | EX28DRAFT_1519 | 0.90 | +1.3 | |
1,533,468 | - | EX28DRAFT_1519 | 0.90 | +0.4 | |
1,533,468 | - | EX28DRAFT_1519 | 0.90 | -0.9 | |
1,533,468 | - | EX28DRAFT_1519 | 0.90 | +0.2 | |
1,533,470 | - | EX28DRAFT_1519 | 0.90 | -0.9 | |
1,533,610 | - | +1.0 | |||
1,533,691 | + | +1.1 | |||
1,533,692 | - | -0.0 | |||
1,533,726 | + | +0.7 | |||
1,533,727 | - | +0.3 | |||
1,533,842 | - | -0.4 | |||
1,534,042 | - | EX28DRAFT_1520 | 0.15 | -0.1 | |
1,534,361 | - | EX28DRAFT_1520 | 0.25 | +1.5 |
Or see this region's nucleotide sequence