Strain Fitness in Enterobacter asburiae PDN3 around EX28DRAFT_1497

Experiment: MS_media with m-arsenite 1 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEX28DRAFT_1496 and EX28DRAFT_1497 overlap by 11 nucleotidesEX28DRAFT_1497 and EX28DRAFT_1498 are separated by 172 nucleotides EX28DRAFT_1496: EX28DRAFT_1496 - Amino acid transporters, at 1,510,811 to 1,512,202 _1496 EX28DRAFT_1497: EX28DRAFT_1497 - hypothetical protein, at 1,512,192 to 1,512,386 _1497 EX28DRAFT_1498: EX28DRAFT_1498 - Glutamine synthetase, at 1,512,559 to 1,513,977 _1498 Position (kb) 1512 1513Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 1511.253 kb on + strand, within EX28DRAFT_1496at 1511.253 kb on + strand, within EX28DRAFT_1496at 1511.303 kb on - strand, within EX28DRAFT_1496at 1511.303 kb on - strand, within EX28DRAFT_1496at 1511.306 kb on + strand, within EX28DRAFT_1496at 1511.355 kb on + strand, within EX28DRAFT_1496at 1511.581 kb on + strand, within EX28DRAFT_1496at 1511.582 kb on - strand, within EX28DRAFT_1496at 1511.582 kb on - strand, within EX28DRAFT_1496at 1511.696 kb on - strand, within EX28DRAFT_1496at 1511.744 kb on - strand, within EX28DRAFT_1496at 1511.832 kb on + strand, within EX28DRAFT_1496at 1511.833 kb on - strand, within EX28DRAFT_1496at 1511.875 kb on - strand, within EX28DRAFT_1496at 1511.937 kb on + strand, within EX28DRAFT_1496at 1511.938 kb on - strand, within EX28DRAFT_1496at 1512.027 kb on + strand, within EX28DRAFT_1496at 1512.028 kb on - strand, within EX28DRAFT_1496at 1512.028 kb on - strand, within EX28DRAFT_1496at 1512.028 kb on - strand, within EX28DRAFT_1496at 1512.028 kb on - strand, within EX28DRAFT_1496at 1512.077 kb on - strandat 1512.077 kb on - strandat 1512.102 kb on + strandat 1512.193 kb on + strandat 1512.302 kb on - strand, within EX28DRAFT_1497at 1512.368 kb on - strandat 1512.392 kb on - strandat 1512.485 kb on - strandat 1512.515 kb on + strandat 1512.515 kb on + strandat 1512.515 kb on + strandat 1512.515 kb on + strandat 1512.515 kb on + strandat 1512.515 kb on + strandat 1512.516 kb on - strandat 1512.516 kb on - strandat 1512.519 kb on + strandat 1512.519 kb on + strandat 1512.959 kb on + strand, within EX28DRAFT_1498at 1512.959 kb on + strand, within EX28DRAFT_1498at 1513.191 kb on + strand, within EX28DRAFT_1498at 1513.191 kb on + strand, within EX28DRAFT_1498at 1513.192 kb on - strand, within EX28DRAFT_1498at 1513.192 kb on - strand, within EX28DRAFT_1498at 1513.192 kb on - strand, within EX28DRAFT_1498

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Per-strain Table

Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM
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1,511,253 + EX28DRAFT_1496 0.32 -0.1
1,511,253 + EX28DRAFT_1496 0.32 +0.8
1,511,303 - EX28DRAFT_1496 0.35 +0.1
1,511,303 - EX28DRAFT_1496 0.35 -0.2
1,511,306 + EX28DRAFT_1496 0.36 +0.3
1,511,355 + EX28DRAFT_1496 0.39 -0.1
1,511,581 + EX28DRAFT_1496 0.55 -0.4
1,511,582 - EX28DRAFT_1496 0.55 -0.2
1,511,582 - EX28DRAFT_1496 0.55 -1.3
1,511,696 - EX28DRAFT_1496 0.64 -0.6
1,511,744 - EX28DRAFT_1496 0.67 -1.0
1,511,832 + EX28DRAFT_1496 0.73 +1.0
1,511,833 - EX28DRAFT_1496 0.73 -0.1
1,511,875 - EX28DRAFT_1496 0.76 +0.4
1,511,937 + EX28DRAFT_1496 0.81 -2.9
1,511,938 - EX28DRAFT_1496 0.81 +0.3
1,512,027 + EX28DRAFT_1496 0.87 +0.7
1,512,028 - EX28DRAFT_1496 0.87 +0.5
1,512,028 - EX28DRAFT_1496 0.87 -0.1
1,512,028 - EX28DRAFT_1496 0.87 -0.6
1,512,028 - EX28DRAFT_1496 0.87 +0.6
1,512,077 - +0.6
1,512,077 - +0.3
1,512,102 + -2.2
1,512,193 + +0.6
1,512,302 - EX28DRAFT_1497 0.56 +0.7
1,512,368 - -1.3
1,512,392 - +0.5
1,512,485 - +0.3
1,512,515 + +0.7
1,512,515 + +0.3
1,512,515 + +0.5
1,512,515 + -0.2
1,512,515 + -0.3
1,512,515 + -1.2
1,512,516 - -1.0
1,512,516 - -0.1
1,512,519 + +0.7
1,512,519 + +0.0
1,512,959 + EX28DRAFT_1498 0.28 -0.0
1,512,959 + EX28DRAFT_1498 0.28 -0.0
1,513,191 + EX28DRAFT_1498 0.45 -3.8
1,513,191 + EX28DRAFT_1498 0.45 -0.2
1,513,192 - EX28DRAFT_1498 0.45 -0.1
1,513,192 - EX28DRAFT_1498 0.45 +0.8
1,513,192 - EX28DRAFT_1498 0.45 -0.4

Or see this region's nucleotide sequence