Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1365 and EX28DRAFT_1366 are separated by 95 nucleotides EX28DRAFT_1366 and EX28DRAFT_1367 are separated by 4 nucleotides EX28DRAFT_1367 and EX28DRAFT_1368 overlap by 4 nucleotides EX28DRAFT_1368 and EX28DRAFT_1369 overlap by 4 nucleotides
EX28DRAFT_1365: EX28DRAFT_1365 - Transcriptional regulator, at 1,383,209 to 1,384,141
_1365
EX28DRAFT_1366: EX28DRAFT_1366 - Uncharacterized protein conserved in bacteria, at 1,384,237 to 1,384,671
_1366
EX28DRAFT_1367: EX28DRAFT_1367 - Uncharacterized protein conserved in bacteria, at 1,384,676 to 1,385,134
_1367
EX28DRAFT_1368: EX28DRAFT_1368 - Protein of unknown function (DUF3833), at 1,385,131 to 1,385,664
_1368
EX28DRAFT_1369: EX28DRAFT_1369 - hypothetical protein, at 1,385,661 to 1,386,182
_1369
Position (kb)
1384
1385
1386 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1383.758 kb on + strand, within EX28DRAFT_1365 at 1383.978 kb on + strand, within EX28DRAFT_1365 at 1383.979 kb on - strand, within EX28DRAFT_1365 at 1384.204 kb on + strand at 1384.471 kb on + strand, within EX28DRAFT_1366 at 1384.617 kb on + strand, within EX28DRAFT_1366 at 1384.618 kb on - strand, within EX28DRAFT_1366 at 1384.636 kb on - strand at 1384.676 kb on - strand at 1384.686 kb on + strand at 1384.687 kb on - strand at 1384.843 kb on + strand, within EX28DRAFT_1367 at 1385.090 kb on + strand at 1385.091 kb on - strand at 1385.099 kb on + strand at 1385.100 kb on - strand at 1385.235 kb on - strand, within EX28DRAFT_1368 at 1385.294 kb on + strand, within EX28DRAFT_1368 at 1385.367 kb on - strand, within EX28DRAFT_1368 at 1385.389 kb on + strand, within EX28DRAFT_1368 at 1385.390 kb on - strand, within EX28DRAFT_1368 at 1385.390 kb on - strand, within EX28DRAFT_1368 at 1385.391 kb on + strand, within EX28DRAFT_1368 at 1385.610 kb on + strand, within EX28DRAFT_1368 at 1385.778 kb on - strand, within EX28DRAFT_1369 at 1385.992 kb on + strand, within EX28DRAFT_1369 at 1385.992 kb on + strand, within EX28DRAFT_1369 at 1385.993 kb on - strand, within EX28DRAFT_1369 at 1385.997 kb on - strand, within EX28DRAFT_1369 at 1385.997 kb on - strand, within EX28DRAFT_1369 at 1386.000 kb on - strand, within EX28DRAFT_1369 at 1386.000 kb on - strand, within EX28DRAFT_1369 at 1386.048 kb on + strand, within EX28DRAFT_1369 at 1386.059 kb on + strand, within EX28DRAFT_1369 at 1386.059 kb on + strand, within EX28DRAFT_1369 at 1386.059 kb on + strand, within EX28DRAFT_1369 at 1386.060 kb on - strand, within EX28DRAFT_1369 at 1386.061 kb on + strand, within EX28DRAFT_1369 at 1386.062 kb on - strand, within EX28DRAFT_1369
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 1,383,758 + EX28DRAFT_1365 0.59 +0.2 1,383,978 + EX28DRAFT_1365 0.82 -0.7 1,383,979 - EX28DRAFT_1365 0.83 +0.1 1,384,204 + +0.4 1,384,471 + EX28DRAFT_1366 0.54 +0.3 1,384,617 + EX28DRAFT_1366 0.87 +0.1 1,384,618 - EX28DRAFT_1366 0.88 -0.2 1,384,636 - +0.0 1,384,676 - -1.8 1,384,686 + -0.8 1,384,687 - -1.4 1,384,843 + EX28DRAFT_1367 0.36 +0.6 1,385,090 + +0.4 1,385,091 - +1.3 1,385,099 + +0.4 1,385,100 - +0.5 1,385,235 - EX28DRAFT_1368 0.19 -0.5 1,385,294 + EX28DRAFT_1368 0.31 +0.3 1,385,367 - EX28DRAFT_1368 0.44 -2.7 1,385,389 + EX28DRAFT_1368 0.48 -0.6 1,385,390 - EX28DRAFT_1368 0.49 -0.4 1,385,390 - EX28DRAFT_1368 0.49 +0.6 1,385,391 + EX28DRAFT_1368 0.49 -0.8 1,385,610 + EX28DRAFT_1368 0.90 +0.1 1,385,778 - EX28DRAFT_1369 0.22 -0.2 1,385,992 + EX28DRAFT_1369 0.63 +0.2 1,385,992 + EX28DRAFT_1369 0.63 +0.7 1,385,993 - EX28DRAFT_1369 0.64 +0.4 1,385,997 - EX28DRAFT_1369 0.64 -0.4 1,385,997 - EX28DRAFT_1369 0.64 -0.5 1,386,000 - EX28DRAFT_1369 0.65 +0.2 1,386,000 - EX28DRAFT_1369 0.65 -0.5 1,386,048 + EX28DRAFT_1369 0.74 -0.5 1,386,059 + EX28DRAFT_1369 0.76 +2.0 1,386,059 + EX28DRAFT_1369 0.76 -1.1 1,386,059 + EX28DRAFT_1369 0.76 -2.3 1,386,060 - EX28DRAFT_1369 0.76 -3.0 1,386,061 + EX28DRAFT_1369 0.77 -1.8 1,386,062 - EX28DRAFT_1369 0.77 -0.4
Or see this region's nucleotide sequence