Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1247 and EX28DRAFT_1248 are separated by 6 nucleotides EX28DRAFT_1248 and EX28DRAFT_1249 are separated by 17 nucleotides EX28DRAFT_1249 and EX28DRAFT_1250 are separated by 11 nucleotides
EX28DRAFT_1247: EX28DRAFT_1247 - Glycosidases, at 1,264,240 to 1,265,865
_1247
EX28DRAFT_1248: EX28DRAFT_1248 - Short-chain dehydrogenases of various substrate specificities, at 1,265,872 to 1,266,852
_1248
EX28DRAFT_1249: EX28DRAFT_1249 - amidohydrolase, PncC family, at 1,266,870 to 1,267,388
_1249
EX28DRAFT_1250: EX28DRAFT_1250 - Protein of unknown function (DUF421), at 1,267,400 to 1,267,846
_1250
Position (kb) 1265
1266
1267 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 1264.899 kb on + strand, within EX28DRAFT_1247 at 1264.899 kb on + strand, within EX28DRAFT_1247 at 1264.972 kb on + strand, within EX28DRAFT_1247 at 1264.972 kb on + strand, within EX28DRAFT_1247 at 1264.972 kb on + strand, within EX28DRAFT_1247 at 1264.973 kb on - strand, within EX28DRAFT_1247 at 1264.973 kb on - strand, within EX28DRAFT_1247 at 1264.973 kb on - strand, within EX28DRAFT_1247 at 1264.974 kb on + strand, within EX28DRAFT_1247 at 1264.974 kb on + strand, within EX28DRAFT_1247 at 1264.974 kb on + strand, within EX28DRAFT_1247 at 1265.035 kb on + strand, within EX28DRAFT_1247 at 1265.035 kb on + strand, within EX28DRAFT_1247 at 1265.036 kb on - strand, within EX28DRAFT_1247 at 1265.341 kb on + strand, within EX28DRAFT_1247 at 1265.568 kb on + strand, within EX28DRAFT_1247 at 1265.868 kb on - strand at 1266.268 kb on - strand, within EX28DRAFT_1248 at 1266.483 kb on + strand, within EX28DRAFT_1248 at 1266.524 kb on + strand, within EX28DRAFT_1248 at 1266.561 kb on + strand, within EX28DRAFT_1248 at 1266.853 kb on - strand at 1266.853 kb on - strand at 1266.853 kb on - strand at 1266.865 kb on + strand at 1266.866 kb on - strand at 1266.866 kb on - strand at 1267.359 kb on - strand at 1267.456 kb on + strand, within EX28DRAFT_1250 at 1267.815 kb on + strand at 1267.820 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 1,264,899 + EX28DRAFT_1247 0.41 -1.1 1,264,899 + EX28DRAFT_1247 0.41 +0.3 1,264,972 + EX28DRAFT_1247 0.45 +0.6 1,264,972 + EX28DRAFT_1247 0.45 -0.8 1,264,972 + EX28DRAFT_1247 0.45 -0.7 1,264,973 - EX28DRAFT_1247 0.45 -0.6 1,264,973 - EX28DRAFT_1247 0.45 +0.7 1,264,973 - EX28DRAFT_1247 0.45 -0.9 1,264,974 + EX28DRAFT_1247 0.45 +0.0 1,264,974 + EX28DRAFT_1247 0.45 +0.6 1,264,974 + EX28DRAFT_1247 0.45 -3.0 1,265,035 + EX28DRAFT_1247 0.49 +0.2 1,265,035 + EX28DRAFT_1247 0.49 -0.0 1,265,036 - EX28DRAFT_1247 0.49 +0.4 1,265,341 + EX28DRAFT_1247 0.68 -0.4 1,265,568 + EX28DRAFT_1247 0.82 +0.1 1,265,868 - -0.5 1,266,268 - EX28DRAFT_1248 0.40 +0.0 1,266,483 + EX28DRAFT_1248 0.62 +0.3 1,266,524 + EX28DRAFT_1248 0.66 -0.5 1,266,561 + EX28DRAFT_1248 0.70 -1.1 1,266,853 - -0.1 1,266,853 - +0.1 1,266,853 - +0.2 1,266,865 + -0.4 1,266,866 - -1.1 1,266,866 - -0.8 1,267,359 - -0.4 1,267,456 + EX28DRAFT_1250 0.13 -0.4 1,267,815 + +0.1 1,267,820 - -0.5
Or see this region's nucleotide sequence