Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1243 and EX28DRAFT_1244 are separated by 15 nucleotides EX28DRAFT_1244 and EX28DRAFT_1245 are separated by 68 nucleotides EX28DRAFT_1245 and EX28DRAFT_1246 overlap by 1 nucleotides
EX28DRAFT_1243: EX28DRAFT_1243 - Uncharacterized protein conserved in bacteria, at 1,260,352 to 1,260,861
_1243
EX28DRAFT_1244: EX28DRAFT_1244 - Mn-containing catalase, at 1,260,877 to 1,261,749
_1244
EX28DRAFT_1245: EX28DRAFT_1245 - Cytochrome bd-type quinol oxidase, subunit 1, at 1,261,818 to 1,263,221
_1245
EX28DRAFT_1246: EX28DRAFT_1246 - cytochrome d oxidase, subunit II (cydB), at 1,263,221 to 1,264,231
_1246
Position (kb)
1261
1262
1263
1264 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1261.073 kb on + strand, within EX28DRAFT_1244 at 1261.073 kb on + strand, within EX28DRAFT_1244 at 1261.073 kb on + strand, within EX28DRAFT_1244 at 1261.074 kb on - strand, within EX28DRAFT_1244 at 1261.203 kb on + strand, within EX28DRAFT_1244 at 1261.203 kb on + strand, within EX28DRAFT_1244 at 1261.206 kb on + strand, within EX28DRAFT_1244 at 1261.206 kb on + strand, within EX28DRAFT_1244 at 1261.207 kb on - strand, within EX28DRAFT_1244 at 1261.207 kb on - strand, within EX28DRAFT_1244 at 1261.207 kb on - strand, within EX28DRAFT_1244 at 1261.219 kb on + strand, within EX28DRAFT_1244 at 1261.273 kb on + strand, within EX28DRAFT_1244 at 1261.273 kb on + strand, within EX28DRAFT_1244 at 1261.349 kb on - strand, within EX28DRAFT_1244 at 1261.349 kb on - strand, within EX28DRAFT_1244 at 1261.516 kb on + strand, within EX28DRAFT_1244 at 1261.516 kb on + strand, within EX28DRAFT_1244 at 1261.516 kb on + strand, within EX28DRAFT_1244 at 1261.517 kb on - strand, within EX28DRAFT_1244 at 1261.519 kb on + strand, within EX28DRAFT_1244 at 1261.520 kb on - strand, within EX28DRAFT_1244 at 1261.520 kb on - strand, within EX28DRAFT_1244 at 1261.520 kb on - strand, within EX28DRAFT_1244 at 1261.524 kb on + strand, within EX28DRAFT_1244 at 1261.524 kb on + strand, within EX28DRAFT_1244 at 1261.524 kb on + strand, within EX28DRAFT_1244 at 1261.525 kb on - strand, within EX28DRAFT_1244 at 1261.525 kb on - strand, within EX28DRAFT_1244 at 1261.734 kb on + strand at 1261.741 kb on - strand at 1261.741 kb on - strand at 1261.917 kb on + strand at 1261.918 kb on - strand at 1261.918 kb on - strand at 1261.977 kb on + strand, within EX28DRAFT_1245 at 1262.115 kb on + strand, within EX28DRAFT_1245 at 1262.115 kb on + strand, within EX28DRAFT_1245 at 1262.116 kb on - strand, within EX28DRAFT_1245 at 1262.181 kb on - strand, within EX28DRAFT_1245 at 1262.375 kb on + strand, within EX28DRAFT_1245 at 1262.376 kb on - strand, within EX28DRAFT_1245 at 1262.534 kb on + strand, within EX28DRAFT_1245 at 1262.534 kb on + strand, within EX28DRAFT_1245 at 1262.534 kb on + strand, within EX28DRAFT_1245 at 1262.535 kb on - strand, within EX28DRAFT_1245 at 1262.535 kb on - strand, within EX28DRAFT_1245 at 1262.670 kb on + strand, within EX28DRAFT_1245 at 1262.671 kb on - strand, within EX28DRAFT_1245 at 1262.671 kb on - strand, within EX28DRAFT_1245 at 1262.828 kb on + strand, within EX28DRAFT_1245 at 1262.840 kb on + strand, within EX28DRAFT_1245 at 1262.986 kb on - strand, within EX28DRAFT_1245 at 1263.069 kb on + strand, within EX28DRAFT_1245 at 1263.100 kb on - strand at 1263.100 kb on - strand at 1263.116 kb on + strand at 1263.116 kb on + strand at 1263.233 kb on - strand at 1263.278 kb on + strand at 1263.278 kb on + strand at 1263.278 kb on + strand at 1263.279 kb on - strand at 1263.323 kb on - strand, within EX28DRAFT_1246 at 1263.323 kb on - strand, within EX28DRAFT_1246 at 1263.447 kb on - strand, within EX28DRAFT_1246 at 1263.447 kb on - strand, within EX28DRAFT_1246 at 1263.492 kb on + strand, within EX28DRAFT_1246 at 1263.492 kb on + strand, within EX28DRAFT_1246 at 1263.493 kb on - strand, within EX28DRAFT_1246 at 1263.493 kb on - strand, within EX28DRAFT_1246 at 1263.570 kb on - strand, within EX28DRAFT_1246 at 1263.876 kb on - strand, within EX28DRAFT_1246 at 1264.021 kb on + strand, within EX28DRAFT_1246 at 1264.022 kb on - strand, within EX28DRAFT_1246 at 1264.069 kb on + strand, within EX28DRAFT_1246 at 1264.126 kb on + strand, within EX28DRAFT_1246 at 1264.170 kb on - strand at 1264.184 kb on + strand at 1264.184 kb on + strand at 1264.187 kb on + strand at 1264.187 kb on + strand at 1264.188 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 1,261,073 + EX28DRAFT_1244 0.22 +1.6 1,261,073 + EX28DRAFT_1244 0.22 -0.8 1,261,073 + EX28DRAFT_1244 0.22 -0.1 1,261,074 - EX28DRAFT_1244 0.23 +0.2 1,261,203 + EX28DRAFT_1244 0.37 +0.2 1,261,203 + EX28DRAFT_1244 0.37 -0.7 1,261,206 + EX28DRAFT_1244 0.38 -2.0 1,261,206 + EX28DRAFT_1244 0.38 +0.9 1,261,207 - EX28DRAFT_1244 0.38 +0.3 1,261,207 - EX28DRAFT_1244 0.38 -0.3 1,261,207 - EX28DRAFT_1244 0.38 +0.0 1,261,219 + EX28DRAFT_1244 0.39 -0.6 1,261,273 + EX28DRAFT_1244 0.45 -0.3 1,261,273 + EX28DRAFT_1244 0.45 -0.0 1,261,349 - EX28DRAFT_1244 0.54 +0.6 1,261,349 - EX28DRAFT_1244 0.54 +0.5 1,261,516 + EX28DRAFT_1244 0.73 +0.5 1,261,516 + EX28DRAFT_1244 0.73 -0.7 1,261,516 + EX28DRAFT_1244 0.73 -0.5 1,261,517 - EX28DRAFT_1244 0.73 +0.6 1,261,519 + EX28DRAFT_1244 0.74 -0.8 1,261,520 - EX28DRAFT_1244 0.74 -0.5 1,261,520 - EX28DRAFT_1244 0.74 -0.2 1,261,520 - EX28DRAFT_1244 0.74 -1.9 1,261,524 + EX28DRAFT_1244 0.74 +1.2 1,261,524 + EX28DRAFT_1244 0.74 +1.5 1,261,524 + EX28DRAFT_1244 0.74 +0.5 1,261,525 - EX28DRAFT_1244 0.74 +0.4 1,261,525 - EX28DRAFT_1244 0.74 -0.3 1,261,734 + -0.4 1,261,741 - -1.3 1,261,741 - -0.7 1,261,917 + +0.4 1,261,918 - -0.0 1,261,918 - +0.4 1,261,977 + EX28DRAFT_1245 0.11 +0.4 1,262,115 + EX28DRAFT_1245 0.21 -0.1 1,262,115 + EX28DRAFT_1245 0.21 +0.3 1,262,116 - EX28DRAFT_1245 0.21 -0.9 1,262,181 - EX28DRAFT_1245 0.26 +0.1 1,262,375 + EX28DRAFT_1245 0.40 +0.1 1,262,376 - EX28DRAFT_1245 0.40 +1.6 1,262,534 + EX28DRAFT_1245 0.51 +0.1 1,262,534 + EX28DRAFT_1245 0.51 -0.6 1,262,534 + EX28DRAFT_1245 0.51 -1.0 1,262,535 - EX28DRAFT_1245 0.51 +0.1 1,262,535 - EX28DRAFT_1245 0.51 +0.1 1,262,670 + EX28DRAFT_1245 0.61 +0.6 1,262,671 - EX28DRAFT_1245 0.61 +0.2 1,262,671 - EX28DRAFT_1245 0.61 +0.1 1,262,828 + EX28DRAFT_1245 0.72 -0.8 1,262,840 + EX28DRAFT_1245 0.73 +0.4 1,262,986 - EX28DRAFT_1245 0.83 +0.6 1,263,069 + EX28DRAFT_1245 0.89 +1.6 1,263,100 - +0.3 1,263,100 - +0.1 1,263,116 + +1.1 1,263,116 + -1.3 1,263,233 - -0.9 1,263,278 + -0.2 1,263,278 + +0.2 1,263,278 + +0.6 1,263,279 - +0.5 1,263,323 - EX28DRAFT_1246 0.10 -1.1 1,263,323 - EX28DRAFT_1246 0.10 -0.7 1,263,447 - EX28DRAFT_1246 0.22 -1.4 1,263,447 - EX28DRAFT_1246 0.22 +1.6 1,263,492 + EX28DRAFT_1246 0.27 +1.0 1,263,492 + EX28DRAFT_1246 0.27 +0.0 1,263,493 - EX28DRAFT_1246 0.27 -1.3 1,263,493 - EX28DRAFT_1246 0.27 -0.0 1,263,570 - EX28DRAFT_1246 0.35 -0.7 1,263,876 - EX28DRAFT_1246 0.65 +1.8 1,264,021 + EX28DRAFT_1246 0.79 +0.2 1,264,022 - EX28DRAFT_1246 0.79 +0.7 1,264,069 + EX28DRAFT_1246 0.84 -0.2 1,264,126 + EX28DRAFT_1246 0.90 +0.3 1,264,170 - -0.6 1,264,184 + +0.0 1,264,184 + +0.5 1,264,187 + -0.0 1,264,187 + +0.6 1,264,188 - +0.5
Or see this region's nucleotide sequence