Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1149 and EX28DRAFT_1150 are separated by 112 nucleotides EX28DRAFT_1150 and EX28DRAFT_1151 overlap by 10 nucleotides EX28DRAFT_1151 and EX28DRAFT_1152 overlap by 53 nucleotides
EX28DRAFT_1149: EX28DRAFT_1149 - 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases, at 1,166,782 to 1,168,269
_1149
EX28DRAFT_1150: EX28DRAFT_1150 - Transcriptional regulator, at 1,168,382 to 1,169,266
_1150
EX28DRAFT_1151: EX28DRAFT_1151 - Transcriptional regulator, at 1,169,257 to 1,170,222
_1151
EX28DRAFT_1152: EX28DRAFT_1152 - Metallo-beta-lactamase superfamily, at 1,170,170 to 1,171,156
_1152
Position (kb)
1168
1169
1170 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1167.393 kb on - strand, within EX28DRAFT_1149 at 1167.621 kb on - strand, within EX28DRAFT_1149 at 1167.621 kb on - strand, within EX28DRAFT_1149 at 1167.903 kb on - strand, within EX28DRAFT_1149 at 1168.206 kb on - strand at 1168.206 kb on - strand at 1168.290 kb on + strand at 1168.489 kb on - strand, within EX28DRAFT_1150 at 1168.660 kb on - strand, within EX28DRAFT_1150 at 1168.726 kb on + strand, within EX28DRAFT_1150 at 1168.744 kb on + strand, within EX28DRAFT_1150 at 1168.898 kb on + strand, within EX28DRAFT_1150 at 1169.003 kb on + strand, within EX28DRAFT_1150 at 1169.003 kb on + strand, within EX28DRAFT_1150 at 1169.340 kb on - strand at 1169.474 kb on + strand, within EX28DRAFT_1151 at 1169.474 kb on + strand, within EX28DRAFT_1151 at 1169.475 kb on - strand, within EX28DRAFT_1151 at 1169.714 kb on + strand, within EX28DRAFT_1151 at 1169.714 kb on + strand, within EX28DRAFT_1151 at 1169.715 kb on - strand, within EX28DRAFT_1151 at 1169.718 kb on + strand, within EX28DRAFT_1151 at 1170.142 kb on + strand at 1170.142 kb on + strand at 1170.143 kb on - strand at 1170.143 kb on - strand at 1170.143 kb on - strand at 1170.143 kb on - strand at 1170.143 kb on - strand at 1170.171 kb on + strand at 1170.172 kb on - strand at 1170.199 kb on + strand at 1170.200 kb on - strand at 1170.202 kb on - strand at 1170.202 kb on - strand at 1170.202 kb on - strand at 1170.202 kb on - strand at 1170.250 kb on - strand at 1170.250 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 1,167,393 - EX28DRAFT_1149 0.41 -3.3 1,167,621 - EX28DRAFT_1149 0.56 +0.2 1,167,621 - EX28DRAFT_1149 0.56 -0.2 1,167,903 - EX28DRAFT_1149 0.75 -1.2 1,168,206 - +0.1 1,168,206 - -0.6 1,168,290 + -0.3 1,168,489 - EX28DRAFT_1150 0.12 -0.4 1,168,660 - EX28DRAFT_1150 0.31 +0.2 1,168,726 + EX28DRAFT_1150 0.39 +0.3 1,168,744 + EX28DRAFT_1150 0.41 -0.1 1,168,898 + EX28DRAFT_1150 0.58 +0.5 1,169,003 + EX28DRAFT_1150 0.70 +0.9 1,169,003 + EX28DRAFT_1150 0.70 +0.6 1,169,340 - -1.7 1,169,474 + EX28DRAFT_1151 0.22 -1.3 1,169,474 + EX28DRAFT_1151 0.22 +0.3 1,169,475 - EX28DRAFT_1151 0.23 +3.1 1,169,714 + EX28DRAFT_1151 0.47 +0.2 1,169,714 + EX28DRAFT_1151 0.47 +0.5 1,169,715 - EX28DRAFT_1151 0.47 -0.1 1,169,718 + EX28DRAFT_1151 0.48 +0.0 1,170,142 + -0.7 1,170,142 + -1.2 1,170,143 - +0.2 1,170,143 - -1.6 1,170,143 - +0.9 1,170,143 - +0.4 1,170,143 - +1.4 1,170,171 + -0.2 1,170,172 - -0.8 1,170,199 + +2.6 1,170,200 - +2.4 1,170,202 - -1.6 1,170,202 - -0.5 1,170,202 - -0.2 1,170,202 - +0.7 1,170,250 - -2.0 1,170,250 - -0.9
Or see this region's nucleotide sequence