Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1132 and EX28DRAFT_1133 are separated by 7 nucleotides EX28DRAFT_1133 and EX28DRAFT_1134 are separated by 41 nucleotides EX28DRAFT_1134 and EX28DRAFT_1135 are separated by 40 nucleotides
EX28DRAFT_1132: EX28DRAFT_1132 - Thiol:disulfide interchange protein, at 1,145,859 to 1,147,883
_1132
EX28DRAFT_1133: EX28DRAFT_1133 - Protein-disulfide isomerase, at 1,147,891 to 1,148,502
_1133
EX28DRAFT_1134: EX28DRAFT_1134 - Protein-disulfide isomerase, at 1,148,544 to 1,149,302
_1134
EX28DRAFT_1135: EX28DRAFT_1135 - Uncharacterized protein conserved in bacteria, at 1,149,343 to 1,150,635
_1135
Position (kb) 1147
1148
1149 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 1146.932 kb on + strand, within EX28DRAFT_1132 at 1147.274 kb on - strand, within EX28DRAFT_1132 at 1147.330 kb on + strand, within EX28DRAFT_1132 at 1147.331 kb on - strand, within EX28DRAFT_1132 at 1147.608 kb on - strand, within EX28DRAFT_1132 at 1147.887 kb on + strand at 1147.887 kb on + strand at 1147.887 kb on + strand at 1147.888 kb on - strand at 1147.888 kb on - strand at 1147.909 kb on - strand at 1148.077 kb on + strand, within EX28DRAFT_1133 at 1148.077 kb on + strand, within EX28DRAFT_1133 at 1148.094 kb on + strand, within EX28DRAFT_1133 at 1148.110 kb on + strand, within EX28DRAFT_1133 at 1148.158 kb on - strand, within EX28DRAFT_1133 at 1148.241 kb on + strand, within EX28DRAFT_1133 at 1148.558 kb on - strand at 1148.560 kb on + strand at 1148.561 kb on - strand at 1148.649 kb on - strand, within EX28DRAFT_1134 at 1148.649 kb on - strand, within EX28DRAFT_1134 at 1148.820 kb on + strand, within EX28DRAFT_1134 at 1149.213 kb on + strand, within EX28DRAFT_1134 at 1149.216 kb on + strand, within EX28DRAFT_1134 at 1149.217 kb on - strand, within EX28DRAFT_1134
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 1,146,932 + EX28DRAFT_1132 0.53 -0.1 1,147,274 - EX28DRAFT_1132 0.70 +0.5 1,147,330 + EX28DRAFT_1132 0.73 -0.1 1,147,331 - EX28DRAFT_1132 0.73 -0.2 1,147,608 - EX28DRAFT_1132 0.86 -0.0 1,147,887 + +0.1 1,147,887 + -0.1 1,147,887 + +0.2 1,147,888 - -0.9 1,147,888 - -0.1 1,147,909 - +0.6 1,148,077 + EX28DRAFT_1133 0.30 +1.1 1,148,077 + EX28DRAFT_1133 0.30 +2.5 1,148,094 + EX28DRAFT_1133 0.33 -0.3 1,148,110 + EX28DRAFT_1133 0.36 -0.1 1,148,158 - EX28DRAFT_1133 0.44 -0.0 1,148,241 + EX28DRAFT_1133 0.57 +0.5 1,148,558 - +1.1 1,148,560 + +0.6 1,148,561 - +0.5 1,148,649 - EX28DRAFT_1134 0.14 -0.7 1,148,649 - EX28DRAFT_1134 0.14 +0.9 1,148,820 + EX28DRAFT_1134 0.36 +1.0 1,149,213 + EX28DRAFT_1134 0.88 +0.1 1,149,216 + EX28DRAFT_1134 0.89 -4.3 1,149,217 - EX28DRAFT_1134 0.89 +0.3
Or see this region's nucleotide sequence