Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1120 and EX28DRAFT_1121 are separated by 88 nucleotides EX28DRAFT_1121 and EX28DRAFT_1122 are separated by 173 nucleotides
EX28DRAFT_1120: EX28DRAFT_1120 - FOG: EAL domain, at 1,133,179 to 1,134,423
_1120
EX28DRAFT_1121: EX28DRAFT_1121 - Sugar kinases, ribokinase family, at 1,134,512 to 1,135,402
_1121
EX28DRAFT_1122: EX28DRAFT_1122 - Maltoporin (phage lambda and maltose receptor), at 1,135,576 to 1,137,093
_1122
Position (kb)
1134
1135
1136 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1133.564 kb on - strand, within EX28DRAFT_1120 at 1133.564 kb on - strand, within EX28DRAFT_1120 at 1133.645 kb on - strand, within EX28DRAFT_1120 at 1133.649 kb on - strand, within EX28DRAFT_1120 at 1133.842 kb on + strand, within EX28DRAFT_1120 at 1133.842 kb on + strand, within EX28DRAFT_1120 at 1133.878 kb on + strand, within EX28DRAFT_1120 at 1133.919 kb on + strand, within EX28DRAFT_1120 at 1133.919 kb on + strand, within EX28DRAFT_1120 at 1133.920 kb on - strand, within EX28DRAFT_1120 at 1134.177 kb on + strand, within EX28DRAFT_1120 at 1134.200 kb on + strand, within EX28DRAFT_1120 at 1134.201 kb on - strand, within EX28DRAFT_1120 at 1134.308 kb on + strand at 1134.309 kb on - strand at 1134.397 kb on - strand at 1134.727 kb on + strand, within EX28DRAFT_1121 at 1134.727 kb on + strand, within EX28DRAFT_1121 at 1134.806 kb on - strand, within EX28DRAFT_1121 at 1135.401 kb on - strand at 1135.511 kb on - strand at 1135.561 kb on + strand at 1135.627 kb on - strand at 1136.084 kb on - strand, within EX28DRAFT_1122 at 1136.084 kb on - strand, within EX28DRAFT_1122 at 1136.374 kb on + strand, within EX28DRAFT_1122 at 1136.374 kb on + strand, within EX28DRAFT_1122 at 1136.375 kb on - strand, within EX28DRAFT_1122 at 1136.375 kb on - strand, within EX28DRAFT_1122 at 1136.377 kb on - strand, within EX28DRAFT_1122
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 1,133,564 - EX28DRAFT_1120 0.31 +0.6 1,133,564 - EX28DRAFT_1120 0.31 +0.0 1,133,645 - EX28DRAFT_1120 0.37 -0.2 1,133,649 - EX28DRAFT_1120 0.38 -0.5 1,133,842 + EX28DRAFT_1120 0.53 -0.9 1,133,842 + EX28DRAFT_1120 0.53 -0.6 1,133,878 + EX28DRAFT_1120 0.56 -0.3 1,133,919 + EX28DRAFT_1120 0.59 -0.8 1,133,919 + EX28DRAFT_1120 0.59 -0.9 1,133,920 - EX28DRAFT_1120 0.60 +0.2 1,134,177 + EX28DRAFT_1120 0.80 -1.8 1,134,200 + EX28DRAFT_1120 0.82 +0.3 1,134,201 - EX28DRAFT_1120 0.82 -0.3 1,134,308 + -0.7 1,134,309 - +0.2 1,134,397 - -1.1 1,134,727 + EX28DRAFT_1121 0.24 -2.8 1,134,727 + EX28DRAFT_1121 0.24 -2.7 1,134,806 - EX28DRAFT_1121 0.33 -3.0 1,135,401 - -0.1 1,135,511 - -1.4 1,135,561 + -4.6 1,135,627 - +0.3 1,136,084 - EX28DRAFT_1122 0.33 -4.7 1,136,084 - EX28DRAFT_1122 0.33 -2.2 1,136,374 + EX28DRAFT_1122 0.53 -3.7 1,136,374 + EX28DRAFT_1122 0.53 -4.6 1,136,375 - EX28DRAFT_1122 0.53 -3.6 1,136,375 - EX28DRAFT_1122 0.53 -3.5 1,136,377 - EX28DRAFT_1122 0.53 -3.1
Or see this region's nucleotide sequence