Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1095 and EX28DRAFT_1096 overlap by 1 nucleotides EX28DRAFT_1096 and EX28DRAFT_1097 overlap by 4 nucleotides EX28DRAFT_1097 and EX28DRAFT_1098 are separated by 10 nucleotides
EX28DRAFT_1095: EX28DRAFT_1095 - ATPase components of various ABC-type transport systems, contain duplicated ATPase, at 1,106,424 to 1,108,031
_1095
EX28DRAFT_1096: EX28DRAFT_1096 - ABC-type dipeptide/oligopeptide/nickel transport systems, permease components, at 1,108,031 to 1,108,879
_1096
EX28DRAFT_1097: EX28DRAFT_1097 - ABC-type dipeptide/oligopeptide/nickel transport systems, permease components, at 1,108,876 to 1,109,820
_1097
EX28DRAFT_1098: EX28DRAFT_1098 - ABC transporter substrate binding protein, KPN_01854 family, at 1,109,831 to 1,111,450
_1098
Position (kb) 1108
1109 Strain fitness (log2 ratio) -2
-1
0
1 at 1107.107 kb on + strand, within EX28DRAFT_1095 at 1107.687 kb on - strand, within EX28DRAFT_1095 at 1107.828 kb on + strand, within EX28DRAFT_1095 at 1108.134 kb on + strand, within EX28DRAFT_1096 at 1108.134 kb on + strand, within EX28DRAFT_1096 at 1108.134 kb on + strand, within EX28DRAFT_1096 at 1108.135 kb on - strand, within EX28DRAFT_1096 at 1108.135 kb on - strand, within EX28DRAFT_1096 at 1108.191 kb on + strand, within EX28DRAFT_1096 at 1108.341 kb on + strand, within EX28DRAFT_1096 at 1108.636 kb on + strand, within EX28DRAFT_1096 at 1108.644 kb on + strand, within EX28DRAFT_1096 at 1108.644 kb on + strand, within EX28DRAFT_1096 at 1108.645 kb on - strand, within EX28DRAFT_1096 at 1108.734 kb on + strand, within EX28DRAFT_1096 at 1108.863 kb on + strand at 1108.993 kb on + strand, within EX28DRAFT_1097 at 1108.994 kb on - strand, within EX28DRAFT_1097 at 1109.395 kb on - strand, within EX28DRAFT_1097 at 1109.422 kb on - strand, within EX28DRAFT_1097 at 1109.422 kb on - strand, within EX28DRAFT_1097 at 1109.648 kb on + strand, within EX28DRAFT_1097 at 1109.683 kb on + strand, within EX28DRAFT_1097
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 1,107,107 + EX28DRAFT_1095 0.42 +0.3 1,107,687 - EX28DRAFT_1095 0.79 +0.5 1,107,828 + EX28DRAFT_1095 0.87 +1.3 1,108,134 + EX28DRAFT_1096 0.12 -0.6 1,108,134 + EX28DRAFT_1096 0.12 -0.0 1,108,134 + EX28DRAFT_1096 0.12 -0.9 1,108,135 - EX28DRAFT_1096 0.12 -0.1 1,108,135 - EX28DRAFT_1096 0.12 +0.8 1,108,191 + EX28DRAFT_1096 0.19 -0.0 1,108,341 + EX28DRAFT_1096 0.37 +0.0 1,108,636 + EX28DRAFT_1096 0.71 -0.1 1,108,644 + EX28DRAFT_1096 0.72 -1.1 1,108,644 + EX28DRAFT_1096 0.72 -1.8 1,108,645 - EX28DRAFT_1096 0.72 -0.4 1,108,734 + EX28DRAFT_1096 0.83 +0.4 1,108,863 + -0.4 1,108,993 + EX28DRAFT_1097 0.12 +0.2 1,108,994 - EX28DRAFT_1097 0.12 -0.1 1,109,395 - EX28DRAFT_1097 0.55 -0.6 1,109,422 - EX28DRAFT_1097 0.58 +0.8 1,109,422 - EX28DRAFT_1097 0.58 -0.8 1,109,648 + EX28DRAFT_1097 0.82 +1.4 1,109,683 + EX28DRAFT_1097 0.85 +0.1
Or see this region's nucleotide sequence