Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0992 and EX28DRAFT_0993 overlap by 4 nucleotides EX28DRAFT_0993 and EX28DRAFT_0994 are separated by 112 nucleotides
EX28DRAFT_0992: EX28DRAFT_0992 - Predicted ATPase, at 994,245 to 995,642
_0992
EX28DRAFT_0993: EX28DRAFT_0993 - TIGR01620 family protein, at 995,639 to 996,691
_0993
EX28DRAFT_0994: EX28DRAFT_0994 - Transcriptional regulator of aromatic amino acids metabolism, at 996,804 to 998,345
_0994
Position (kb) 995
996
997 Strain fitness (log2 ratio) -2
-1
0
1 at 995.029 kb on - strand, within EX28DRAFT_0992 at 995.031 kb on + strand, within EX28DRAFT_0992 at 995.031 kb on + strand, within EX28DRAFT_0992 at 995.059 kb on - strand, within EX28DRAFT_0992 at 995.630 kb on + strand at 995.631 kb on - strand at 995.743 kb on + strand at 996.381 kb on + strand, within EX28DRAFT_0993 at 996.381 kb on + strand, within EX28DRAFT_0993 at 996.395 kb on + strand, within EX28DRAFT_0993 at 996.396 kb on - strand, within EX28DRAFT_0993 at 996.434 kb on - strand, within EX28DRAFT_0993 at 996.546 kb on + strand, within EX28DRAFT_0993 at 996.705 kb on + strand at 996.706 kb on - strand at 996.764 kb on + strand at 996.764 kb on + strand at 996.765 kb on - strand at 996.765 kb on - strand at 996.871 kb on + strand at 996.875 kb on + strand at 996.876 kb on - strand at 996.886 kb on + strand at 997.004 kb on - strand, within EX28DRAFT_0994 at 997.004 kb on - strand, within EX28DRAFT_0994 at 997.004 kb on - strand, within EX28DRAFT_0994 at 997.251 kb on - strand, within EX28DRAFT_0994 at 997.251 kb on - strand, within EX28DRAFT_0994 at 997.251 kb on - strand, within EX28DRAFT_0994 at 997.297 kb on - strand, within EX28DRAFT_0994 at 997.575 kb on + strand, within EX28DRAFT_0994 at 997.598 kb on + strand, within EX28DRAFT_0994 at 997.599 kb on - strand, within EX28DRAFT_0994
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 995,029 - EX28DRAFT_0992 0.56 +0.0 995,031 + EX28DRAFT_0992 0.56 +0.4 995,031 + EX28DRAFT_0992 0.56 +0.2 995,059 - EX28DRAFT_0992 0.58 +0.6 995,630 + +1.5 995,631 - +1.5 995,743 + -0.1 996,381 + EX28DRAFT_0993 0.70 +0.6 996,381 + EX28DRAFT_0993 0.70 +0.7 996,395 + EX28DRAFT_0993 0.72 +0.9 996,396 - EX28DRAFT_0993 0.72 +0.4 996,434 - EX28DRAFT_0993 0.75 +0.6 996,546 + EX28DRAFT_0993 0.86 +0.0 996,705 + +0.3 996,706 - -0.6 996,764 + -1.2 996,764 + -0.9 996,765 - +0.2 996,765 - -1.7 996,871 + -0.1 996,875 + +0.5 996,876 - -2.4 996,886 + -0.1 997,004 - EX28DRAFT_0994 0.13 -0.6 997,004 - EX28DRAFT_0994 0.13 -0.6 997,004 - EX28DRAFT_0994 0.13 -0.7 997,251 - EX28DRAFT_0994 0.29 -0.9 997,251 - EX28DRAFT_0994 0.29 +0.4 997,251 - EX28DRAFT_0994 0.29 -1.5 997,297 - EX28DRAFT_0994 0.32 -1.0 997,575 + EX28DRAFT_0994 0.50 -0.8 997,598 + EX28DRAFT_0994 0.51 -0.5 997,599 - EX28DRAFT_0994 0.52 -1.9
Or see this region's nucleotide sequence