Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0991 and EX28DRAFT_0992 are separated by 155 nucleotides EX28DRAFT_0992 and EX28DRAFT_0993 overlap by 4 nucleotides
EX28DRAFT_0991: EX28DRAFT_0991 - transcriptional regulator, LacI family, at 993,079 to 994,089
_0991
EX28DRAFT_0992: EX28DRAFT_0992 - Predicted ATPase, at 994,245 to 995,642
_0992
EX28DRAFT_0993: EX28DRAFT_0993 - TIGR01620 family protein, at 995,639 to 996,691
_0993
Position (kb) 994
995
996 Strain fitness (log2 ratio) -2
-1
0
1 at 993.322 kb on + strand, within EX28DRAFT_0991 at 993.322 kb on + strand, within EX28DRAFT_0991 at 993.322 kb on + strand, within EX28DRAFT_0991 at 993.323 kb on - strand, within EX28DRAFT_0991 at 993.377 kb on - strand, within EX28DRAFT_0991 at 993.712 kb on + strand, within EX28DRAFT_0991 at 993.713 kb on - strand, within EX28DRAFT_0991 at 993.791 kb on - strand, within EX28DRAFT_0991 at 993.795 kb on + strand, within EX28DRAFT_0991 at 994.073 kb on + strand at 994.073 kb on + strand at 994.074 kb on - strand at 994.074 kb on - strand at 994.074 kb on - strand at 994.089 kb on + strand at 994.089 kb on + strand at 994.157 kb on + strand at 994.157 kb on + strand at 994.157 kb on + strand at 994.485 kb on + strand, within EX28DRAFT_0992 at 994.509 kb on + strand, within EX28DRAFT_0992 at 995.029 kb on - strand, within EX28DRAFT_0992 at 995.031 kb on + strand, within EX28DRAFT_0992 at 995.031 kb on + strand, within EX28DRAFT_0992 at 995.059 kb on - strand, within EX28DRAFT_0992 at 995.630 kb on + strand at 995.631 kb on - strand at 995.743 kb on + strand at 996.381 kb on + strand, within EX28DRAFT_0993 at 996.381 kb on + strand, within EX28DRAFT_0993 at 996.395 kb on + strand, within EX28DRAFT_0993 at 996.396 kb on - strand, within EX28DRAFT_0993 at 996.434 kb on - strand, within EX28DRAFT_0993 at 996.546 kb on + strand, within EX28DRAFT_0993
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 993,322 + EX28DRAFT_0991 0.24 -0.4 993,322 + EX28DRAFT_0991 0.24 -0.6 993,322 + EX28DRAFT_0991 0.24 -0.1 993,323 - EX28DRAFT_0991 0.24 -0.8 993,377 - EX28DRAFT_0991 0.29 -0.1 993,712 + EX28DRAFT_0991 0.63 +1.4 993,713 - EX28DRAFT_0991 0.63 -0.3 993,791 - EX28DRAFT_0991 0.70 -0.1 993,795 + EX28DRAFT_0991 0.71 -0.5 994,073 + +1.0 994,073 + -0.2 994,074 - +0.6 994,074 - +0.4 994,074 - -0.1 994,089 + -2.6 994,089 + -2.1 994,157 + +0.3 994,157 + +0.1 994,157 + -0.6 994,485 + EX28DRAFT_0992 0.17 +0.7 994,509 + EX28DRAFT_0992 0.19 +1.0 995,029 - EX28DRAFT_0992 0.56 +0.0 995,031 + EX28DRAFT_0992 0.56 +0.4 995,031 + EX28DRAFT_0992 0.56 +0.2 995,059 - EX28DRAFT_0992 0.58 +0.6 995,630 + +1.5 995,631 - +1.5 995,743 + -0.1 996,381 + EX28DRAFT_0993 0.70 +0.6 996,381 + EX28DRAFT_0993 0.70 +0.7 996,395 + EX28DRAFT_0993 0.72 +0.9 996,396 - EX28DRAFT_0993 0.72 +0.4 996,434 - EX28DRAFT_0993 0.75 +0.6 996,546 + EX28DRAFT_0993 0.86 +0.0
Or see this region's nucleotide sequence