Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0920 and EX28DRAFT_0921 are separated by 41 nucleotides EX28DRAFT_0921 and EX28DRAFT_0922 are separated by 205 nucleotides EX28DRAFT_0922 and EX28DRAFT_0923 are separated by 38 nucleotides
EX28DRAFT_0920: EX28DRAFT_0920 - Transcriptional regulators, at 921,883 to 922,836
_0920
EX28DRAFT_0921: EX28DRAFT_0921 - Uncharacterized protein conserved in bacteria, at 922,878 to 923,174
_0921
EX28DRAFT_0922: EX28DRAFT_0922 - TonB family C-terminal domain, at 923,380 to 924,117
_0922
EX28DRAFT_0923: EX28DRAFT_0923 - Acyl-CoA hydrolase, at 924,156 to 924,551
_0923
Position (kb) 922
923
924 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 921.882 kb on + strand at 921.882 kb on + strand at 921.883 kb on - strand at 921.983 kb on - strand, within EX28DRAFT_0920 at 922.016 kb on + strand, within EX28DRAFT_0920 at 922.022 kb on + strand, within EX28DRAFT_0920 at 922.131 kb on + strand, within EX28DRAFT_0920 at 922.355 kb on + strand, within EX28DRAFT_0920 at 922.356 kb on - strand, within EX28DRAFT_0920 at 922.356 kb on - strand, within EX28DRAFT_0920 at 922.359 kb on + strand, within EX28DRAFT_0920 at 922.360 kb on - strand, within EX28DRAFT_0920 at 922.366 kb on + strand, within EX28DRAFT_0920 at 922.366 kb on + strand, within EX28DRAFT_0920 at 922.367 kb on - strand, within EX28DRAFT_0920 at 922.369 kb on - strand, within EX28DRAFT_0920 at 922.369 kb on - strand, within EX28DRAFT_0920 at 922.369 kb on - strand, within EX28DRAFT_0920 at 922.412 kb on - strand, within EX28DRAFT_0920 at 922.479 kb on + strand, within EX28DRAFT_0920 at 922.602 kb on + strand, within EX28DRAFT_0920 at 922.714 kb on - strand, within EX28DRAFT_0920 at 922.834 kb on + strand at 922.841 kb on + strand at 922.893 kb on - strand at 922.894 kb on + strand at 923.065 kb on - strand, within EX28DRAFT_0921 at 923.207 kb on + strand at 923.207 kb on + strand at 923.208 kb on - strand at 923.213 kb on - strand at 923.240 kb on - strand at 923.260 kb on - strand at 923.260 kb on - strand at 923.386 kb on - strand at 923.911 kb on - strand, within EX28DRAFT_0922 at 923.975 kb on + strand, within EX28DRAFT_0922 at 923.996 kb on + strand, within EX28DRAFT_0922 at 923.998 kb on - strand, within EX28DRAFT_0922
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 921,882 + +0.1 921,882 + -0.9 921,883 - +0.5 921,983 - EX28DRAFT_0920 0.10 +0.2 922,016 + EX28DRAFT_0920 0.14 -0.3 922,022 + EX28DRAFT_0920 0.15 +1.2 922,131 + EX28DRAFT_0920 0.26 -0.3 922,355 + EX28DRAFT_0920 0.49 +0.8 922,356 - EX28DRAFT_0920 0.50 -2.6 922,356 - EX28DRAFT_0920 0.50 -3.5 922,359 + EX28DRAFT_0920 0.50 +0.2 922,360 - EX28DRAFT_0920 0.50 +0.0 922,366 + EX28DRAFT_0920 0.51 +0.3 922,366 + EX28DRAFT_0920 0.51 +0.2 922,367 - EX28DRAFT_0920 0.51 +0.6 922,369 - EX28DRAFT_0920 0.51 -0.2 922,369 - EX28DRAFT_0920 0.51 +0.3 922,369 - EX28DRAFT_0920 0.51 +0.0 922,412 - EX28DRAFT_0920 0.55 +0.2 922,479 + EX28DRAFT_0920 0.62 -0.1 922,602 + EX28DRAFT_0920 0.75 +0.2 922,714 - EX28DRAFT_0920 0.87 -0.3 922,834 + +1.7 922,841 + +0.4 922,893 - +0.3 922,894 + +0.6 923,065 - EX28DRAFT_0921 0.63 +0.7 923,207 + +0.1 923,207 + -0.6 923,208 - -0.1 923,213 - +0.2 923,240 - -0.5 923,260 - -0.3 923,260 - +0.2 923,386 - +1.0 923,911 - EX28DRAFT_0922 0.72 +0.4 923,975 + EX28DRAFT_0922 0.81 -0.1 923,996 + EX28DRAFT_0922 0.83 +2.0 923,998 - EX28DRAFT_0922 0.84 -0.6
Or see this region's nucleotide sequence