Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0905 and EX28DRAFT_0906 overlap by 4 nucleotides EX28DRAFT_0906 and EX28DRAFT_0907 are separated by 10 nucleotides EX28DRAFT_0907 and EX28DRAFT_0908 overlap by 8 nucleotides EX28DRAFT_0908 and EX28DRAFT_0909 are separated by 7 nucleotides
EX28DRAFT_0905: EX28DRAFT_0905 - phage baseplate assembly protein V, at 908,800 to 909,435
_0905
EX28DRAFT_0906: EX28DRAFT_0906 - Phage baseplate assembly protein W, at 909,432 to 909,776
_0906
EX28DRAFT_0907: EX28DRAFT_0907 - Phage-related baseplate assembly protein, at 909,787 to 910,695
_0907
EX28DRAFT_0908: EX28DRAFT_0908 - phage tail protein, P2 protein I family, at 910,688 to 911,221
_0908
EX28DRAFT_0909: EX28DRAFT_0909 - Phage-related tail fibre protein, at 911,229 to 913,094
_0909
Position (kb) 909
910
911 Strain fitness (log2 ratio) -2
-1
0
1
2 at 908.811 kb on + strand at 908.811 kb on + strand at 908.812 kb on - strand at 909.128 kb on - strand, within EX28DRAFT_0905 at 909.243 kb on + strand, within EX28DRAFT_0905 at 909.244 kb on - strand, within EX28DRAFT_0905 at 909.444 kb on + strand at 909.476 kb on + strand, within EX28DRAFT_0906 at 909.494 kb on + strand, within EX28DRAFT_0906 at 909.713 kb on + strand, within EX28DRAFT_0906 at 909.713 kb on + strand, within EX28DRAFT_0906 at 909.714 kb on - strand, within EX28DRAFT_0906 at 909.805 kb on - strand at 909.844 kb on + strand at 909.845 kb on - strand at 909.845 kb on - strand at 909.913 kb on - strand, within EX28DRAFT_0907 at 909.956 kb on + strand, within EX28DRAFT_0907 at 909.957 kb on - strand, within EX28DRAFT_0907 at 910.034 kb on - strand, within EX28DRAFT_0907 at 910.062 kb on - strand, within EX28DRAFT_0907 at 910.429 kb on + strand, within EX28DRAFT_0907 at 910.432 kb on - strand, within EX28DRAFT_0907 at 910.513 kb on + strand, within EX28DRAFT_0907 at 910.513 kb on + strand, within EX28DRAFT_0907 at 910.514 kb on - strand, within EX28DRAFT_0907 at 910.514 kb on - strand, within EX28DRAFT_0907 at 910.514 kb on - strand, within EX28DRAFT_0907 at 910.514 kb on - strand, within EX28DRAFT_0907 at 910.974 kb on - strand, within EX28DRAFT_0908 at 911.076 kb on - strand, within EX28DRAFT_0908 at 911.141 kb on - strand, within EX28DRAFT_0908 at 911.184 kb on - strand at 911.216 kb on - strand at 911.236 kb on + strand at 911.237 kb on - strand at 911.243 kb on + strand at 911.274 kb on - strand at 911.446 kb on - strand, within EX28DRAFT_0909 at 911.511 kb on + strand, within EX28DRAFT_0909 at 911.511 kb on + strand, within EX28DRAFT_0909 at 911.606 kb on + strand, within EX28DRAFT_0909 at 911.607 kb on - strand, within EX28DRAFT_0909 at 911.620 kb on + strand, within EX28DRAFT_0909 at 911.621 kb on - strand, within EX28DRAFT_0909 at 911.682 kb on + strand, within EX28DRAFT_0909 at 911.683 kb on - strand, within EX28DRAFT_0909 at 911.693 kb on + strand, within EX28DRAFT_0909
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 908,811 + +0.2 908,811 + +0.3 908,812 - +0.4 909,128 - EX28DRAFT_0905 0.52 +0.5 909,243 + EX28DRAFT_0905 0.70 +0.7 909,244 - EX28DRAFT_0905 0.70 -2.3 909,444 + -0.1 909,476 + EX28DRAFT_0906 0.13 +1.1 909,494 + EX28DRAFT_0906 0.18 -0.2 909,713 + EX28DRAFT_0906 0.81 +0.1 909,713 + EX28DRAFT_0906 0.81 -0.0 909,714 - EX28DRAFT_0906 0.82 -1.0 909,805 - -0.8 909,844 + +1.1 909,845 - +0.5 909,845 - +0.4 909,913 - EX28DRAFT_0907 0.14 +1.0 909,956 + EX28DRAFT_0907 0.19 +0.4 909,957 - EX28DRAFT_0907 0.19 -0.2 910,034 - EX28DRAFT_0907 0.27 +0.1 910,062 - EX28DRAFT_0907 0.30 +0.2 910,429 + EX28DRAFT_0907 0.71 +0.1 910,432 - EX28DRAFT_0907 0.71 +0.7 910,513 + EX28DRAFT_0907 0.80 +1.1 910,513 + EX28DRAFT_0907 0.80 -0.0 910,514 - EX28DRAFT_0907 0.80 +0.3 910,514 - EX28DRAFT_0907 0.80 +0.6 910,514 - EX28DRAFT_0907 0.80 -0.5 910,514 - EX28DRAFT_0907 0.80 -0.4 910,974 - EX28DRAFT_0908 0.54 -0.2 911,076 - EX28DRAFT_0908 0.73 -1.2 911,141 - EX28DRAFT_0908 0.85 +1.9 911,184 - +0.5 911,216 - +1.1 911,236 + -1.0 911,237 - -0.1 911,243 + -1.6 911,274 - -0.3 911,446 - EX28DRAFT_0909 0.12 -0.9 911,511 + EX28DRAFT_0909 0.15 -0.9 911,511 + EX28DRAFT_0909 0.15 +1.0 911,606 + EX28DRAFT_0909 0.20 -0.7 911,607 - EX28DRAFT_0909 0.20 +0.4 911,620 + EX28DRAFT_0909 0.21 -0.2 911,621 - EX28DRAFT_0909 0.21 -1.5 911,682 + EX28DRAFT_0909 0.24 +0.0 911,683 - EX28DRAFT_0909 0.24 -0.8 911,693 + EX28DRAFT_0909 0.25 -2.2
Or see this region's nucleotide sequence