Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0892 and EX28DRAFT_0893 are separated by 166 nucleotides EX28DRAFT_0893 and EX28DRAFT_0894 are separated by 55 nucleotides
EX28DRAFT_0892: EX28DRAFT_0892 - Uncharacterized conserved protein, at 899,981 to 901,750
_0892
EX28DRAFT_0893: EX28DRAFT_0893 - Phage capsid scaffolding protein (GPO) serine peptidase, at 901,917 to 902,771
_0893
EX28DRAFT_0894: EX28DRAFT_0894 - phage major capsid protein, P2 family, at 902,827 to 903,921
_0894
Position (kb) 901
902
903 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 900.999 kb on + strand, within EX28DRAFT_0892 at 900.999 kb on + strand, within EX28DRAFT_0892 at 901.132 kb on - strand, within EX28DRAFT_0892 at 901.132 kb on - strand, within EX28DRAFT_0892 at 901.135 kb on + strand, within EX28DRAFT_0892 at 901.135 kb on + strand, within EX28DRAFT_0892 at 901.136 kb on - strand, within EX28DRAFT_0892 at 901.146 kb on + strand, within EX28DRAFT_0892 at 901.146 kb on + strand, within EX28DRAFT_0892 at 901.147 kb on - strand, within EX28DRAFT_0892 at 901.159 kb on + strand, within EX28DRAFT_0892 at 901.291 kb on + strand, within EX28DRAFT_0892 at 901.291 kb on + strand, within EX28DRAFT_0892 at 901.368 kb on + strand, within EX28DRAFT_0892 at 901.417 kb on + strand, within EX28DRAFT_0892 at 901.417 kb on + strand, within EX28DRAFT_0892 at 901.550 kb on - strand, within EX28DRAFT_0892 at 901.689 kb on + strand at 901.822 kb on + strand at 901.831 kb on + strand at 901.877 kb on + strand at 902.061 kb on - strand, within EX28DRAFT_0893 at 902.061 kb on - strand, within EX28DRAFT_0893 at 902.169 kb on + strand, within EX28DRAFT_0893 at 902.170 kb on - strand, within EX28DRAFT_0893 at 902.329 kb on - strand, within EX28DRAFT_0893 at 902.624 kb on + strand, within EX28DRAFT_0893 at 902.805 kb on + strand at 902.806 kb on - strand at 902.806 kb on - strand at 902.806 kb on - strand at 902.806 kb on - strand at 902.806 kb on - strand at 902.847 kb on + strand at 903.123 kb on + strand, within EX28DRAFT_0894 at 903.124 kb on - strand, within EX28DRAFT_0894 at 903.127 kb on + strand, within EX28DRAFT_0894 at 903.402 kb on + strand, within EX28DRAFT_0894 at 903.559 kb on + strand, within EX28DRAFT_0894 at 903.560 kb on - strand, within EX28DRAFT_0894 at 903.560 kb on - strand, within EX28DRAFT_0894 at 903.664 kb on + strand, within EX28DRAFT_0894 at 903.720 kb on + strand, within EX28DRAFT_0894
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 900,999 + EX28DRAFT_0892 0.58 +0.1 900,999 + EX28DRAFT_0892 0.58 +0.4 901,132 - EX28DRAFT_0892 0.65 +0.6 901,132 - EX28DRAFT_0892 0.65 -0.4 901,135 + EX28DRAFT_0892 0.65 +0.5 901,135 + EX28DRAFT_0892 0.65 +0.3 901,136 - EX28DRAFT_0892 0.65 -0.2 901,146 + EX28DRAFT_0892 0.66 +1.0 901,146 + EX28DRAFT_0892 0.66 -0.6 901,147 - EX28DRAFT_0892 0.66 +0.2 901,159 + EX28DRAFT_0892 0.67 -0.5 901,291 + EX28DRAFT_0892 0.74 +0.7 901,291 + EX28DRAFT_0892 0.74 -0.1 901,368 + EX28DRAFT_0892 0.78 +0.1 901,417 + EX28DRAFT_0892 0.81 -0.1 901,417 + EX28DRAFT_0892 0.81 -0.2 901,550 - EX28DRAFT_0892 0.89 -3.7 901,689 + +0.1 901,822 + +0.3 901,831 + +0.0 901,877 + +0.3 902,061 - EX28DRAFT_0893 0.17 -0.4 902,061 - EX28DRAFT_0893 0.17 -0.3 902,169 + EX28DRAFT_0893 0.29 -0.3 902,170 - EX28DRAFT_0893 0.30 -1.2 902,329 - EX28DRAFT_0893 0.48 -0.7 902,624 + EX28DRAFT_0893 0.83 +0.6 902,805 + +0.4 902,806 - +0.1 902,806 - +0.8 902,806 - +0.3 902,806 - +0.2 902,806 - -0.8 902,847 + -0.4 903,123 + EX28DRAFT_0894 0.27 -1.0 903,124 - EX28DRAFT_0894 0.27 -0.7 903,127 + EX28DRAFT_0894 0.27 -0.3 903,402 + EX28DRAFT_0894 0.53 -0.5 903,559 + EX28DRAFT_0894 0.67 +0.1 903,560 - EX28DRAFT_0894 0.67 +0.8 903,560 - EX28DRAFT_0894 0.67 -0.5 903,664 + EX28DRAFT_0894 0.76 -0.6 903,720 + EX28DRAFT_0894 0.82 +0.7
Or see this region's nucleotide sequence