Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0863 and EX28DRAFT_0864 are separated by 549 nucleotides EX28DRAFT_0864 and EX28DRAFT_0865 are separated by 65 nucleotides
EX28DRAFT_0863: EX28DRAFT_0863 - DNA-binding protein H-NS, at 874,579 to 874,992
_0863
EX28DRAFT_0864: EX28DRAFT_0864 - thymidine kinase (EC 2.7.1.21), at 875,542 to 876,156
_0864
EX28DRAFT_0865: EX28DRAFT_0865 - Alcohol dehydrogenase, class IV, at 876,222 to 878,900
_0865
Position (kb) 875
876
877 Strain fitness (log2 ratio) -2
-1
0
1 at 875.097 kb on + strand at 875.101 kb on + strand at 875.101 kb on + strand at 875.110 kb on + strand at 875.131 kb on - strand at 875.257 kb on - strand at 875.279 kb on - strand at 875.279 kb on - strand at 875.289 kb on + strand at 875.296 kb on + strand at 875.297 kb on - strand at 875.361 kb on - strand at 875.363 kb on - strand at 875.390 kb on - strand at 875.464 kb on + strand at 875.554 kb on + strand at 875.554 kb on + strand at 875.555 kb on - strand at 875.618 kb on - strand, within EX28DRAFT_0864 at 875.647 kb on + strand, within EX28DRAFT_0864 at 875.648 kb on - strand, within EX28DRAFT_0864 at 875.650 kb on - strand, within EX28DRAFT_0864 at 875.761 kb on - strand, within EX28DRAFT_0864 at 876.056 kb on + strand, within EX28DRAFT_0864 at 876.057 kb on - strand, within EX28DRAFT_0864 at 876.057 kb on - strand, within EX28DRAFT_0864 at 876.073 kb on + strand, within EX28DRAFT_0864 at 876.097 kb on + strand at 876.098 kb on - strand at 876.100 kb on - strand at 876.171 kb on + strand at 876.171 kb on + strand at 876.220 kb on - strand at 876.220 kb on - strand at 876.314 kb on - strand at 876.377 kb on + strand at 876.378 kb on - strand at 876.410 kb on + strand at 876.410 kb on + strand at 876.410 kb on + strand at 876.411 kb on - strand at 876.411 kb on - strand at 876.411 kb on - strand at 876.414 kb on + strand at 876.415 kb on - strand at 876.415 kb on - strand at 876.604 kb on + strand, within EX28DRAFT_0865 at 876.605 kb on - strand, within EX28DRAFT_0865 at 876.648 kb on - strand, within EX28DRAFT_0865 at 876.728 kb on + strand, within EX28DRAFT_0865 at 876.779 kb on + strand, within EX28DRAFT_0865 at 876.779 kb on + strand, within EX28DRAFT_0865 at 876.916 kb on + strand, within EX28DRAFT_0865 at 876.916 kb on + strand, within EX28DRAFT_0865 at 876.917 kb on - strand, within EX28DRAFT_0865 at 876.917 kb on - strand, within EX28DRAFT_0865 at 877.071 kb on + strand, within EX28DRAFT_0865
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 875,097 + -2.4 875,101 + -0.5 875,101 + -1.0 875,110 + -2.3 875,131 - -1.7 875,257 - -0.1 875,279 - -0.8 875,279 - +0.4 875,289 + +0.2 875,296 + -0.9 875,297 - +0.7 875,361 - +0.2 875,363 - -1.1 875,390 - -0.0 875,464 + -1.4 875,554 + -1.9 875,554 + -0.4 875,555 - -0.0 875,618 - EX28DRAFT_0864 0.12 -1.2 875,647 + EX28DRAFT_0864 0.17 +0.4 875,648 - EX28DRAFT_0864 0.17 +0.8 875,650 - EX28DRAFT_0864 0.18 +1.3 875,761 - EX28DRAFT_0864 0.36 +0.1 876,056 + EX28DRAFT_0864 0.84 -1.5 876,057 - EX28DRAFT_0864 0.84 +0.7 876,057 - EX28DRAFT_0864 0.84 +1.6 876,073 + EX28DRAFT_0864 0.86 +0.1 876,097 + -0.5 876,098 - +0.0 876,100 - -0.4 876,171 + -0.7 876,171 + +0.3 876,220 - +0.6 876,220 - +0.9 876,314 - -0.4 876,377 + +0.8 876,378 - -0.5 876,410 + +0.8 876,410 + +0.5 876,410 + -0.5 876,411 - +0.4 876,411 - +0.6 876,411 - +0.0 876,414 + -1.3 876,415 - +0.5 876,415 - -0.1 876,604 + EX28DRAFT_0865 0.14 +0.4 876,605 - EX28DRAFT_0865 0.14 +0.4 876,648 - EX28DRAFT_0865 0.16 -0.8 876,728 + EX28DRAFT_0865 0.19 +0.0 876,779 + EX28DRAFT_0865 0.21 -0.2 876,779 + EX28DRAFT_0865 0.21 +0.4 876,916 + EX28DRAFT_0865 0.26 +0.3 876,916 + EX28DRAFT_0865 0.26 -0.3 876,917 - EX28DRAFT_0865 0.26 +1.4 876,917 - EX28DRAFT_0865 0.26 +0.0 877,071 + EX28DRAFT_0865 0.32 -1.2
Or see this region's nucleotide sequence