Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0824 and EX28DRAFT_0825 overlap by 15 nucleotides EX28DRAFT_0825 and EX28DRAFT_0826 are separated by 124 nucleotides
EX28DRAFT_0824: EX28DRAFT_0824 - Predicted transcriptional regulators, at 827,692 to 828,750
_0824
EX28DRAFT_0825: EX28DRAFT_0825 - high affinity sulphate transporter 1, at 828,736 to 830,415
_0825
EX28DRAFT_0826: EX28DRAFT_0826 - ribose-phosphate pyrophosphokinase, at 830,540 to 831,487
_0826
Position (kb) 828
829
830
831 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 827.756 kb on - strand at 827.972 kb on + strand, within EX28DRAFT_0824 at 827.972 kb on + strand, within EX28DRAFT_0824 at 827.973 kb on - strand, within EX28DRAFT_0824 at 827.973 kb on - strand, within EX28DRAFT_0824 at 827.973 kb on - strand, within EX28DRAFT_0824 at 827.976 kb on + strand, within EX28DRAFT_0824 at 827.977 kb on - strand, within EX28DRAFT_0824 at 828.065 kb on + strand, within EX28DRAFT_0824 at 828.065 kb on + strand, within EX28DRAFT_0824 at 828.072 kb on + strand, within EX28DRAFT_0824 at 828.072 kb on + strand, within EX28DRAFT_0824 at 828.072 kb on + strand, within EX28DRAFT_0824 at 828.072 kb on + strand, within EX28DRAFT_0824 at 828.072 kb on + strand, within EX28DRAFT_0824 at 828.073 kb on - strand, within EX28DRAFT_0824 at 828.073 kb on - strand, within EX28DRAFT_0824 at 828.073 kb on - strand, within EX28DRAFT_0824 at 828.076 kb on + strand, within EX28DRAFT_0824 at 828.195 kb on + strand, within EX28DRAFT_0824 at 828.195 kb on + strand, within EX28DRAFT_0824 at 828.195 kb on + strand, within EX28DRAFT_0824 at 828.195 kb on + strand, within EX28DRAFT_0824 at 828.195 kb on + strand, within EX28DRAFT_0824 at 828.196 kb on - strand, within EX28DRAFT_0824 at 828.388 kb on - strand, within EX28DRAFT_0824 at 828.398 kb on + strand, within EX28DRAFT_0824 at 828.399 kb on - strand, within EX28DRAFT_0824 at 828.409 kb on + strand, within EX28DRAFT_0824 at 828.409 kb on + strand, within EX28DRAFT_0824 at 828.410 kb on - strand, within EX28DRAFT_0824 at 828.410 kb on - strand, within EX28DRAFT_0824 at 828.448 kb on + strand, within EX28DRAFT_0824 at 828.491 kb on + strand, within EX28DRAFT_0824 at 828.578 kb on - strand, within EX28DRAFT_0824 at 828.770 kb on + strand at 828.771 kb on - strand at 829.426 kb on - strand, within EX28DRAFT_0825 at 829.563 kb on + strand, within EX28DRAFT_0825 at 829.701 kb on - strand, within EX28DRAFT_0825 at 829.744 kb on - strand, within EX28DRAFT_0825 at 829.916 kb on + strand, within EX28DRAFT_0825 at 829.980 kb on + strand, within EX28DRAFT_0825 at 829.983 kb on + strand, within EX28DRAFT_0825 at 829.983 kb on + strand, within EX28DRAFT_0825 at 829.983 kb on + strand, within EX28DRAFT_0825 at 830.025 kb on + strand, within EX28DRAFT_0825 at 830.026 kb on - strand, within EX28DRAFT_0825 at 830.027 kb on + strand, within EX28DRAFT_0825 at 830.027 kb on + strand, within EX28DRAFT_0825 at 830.028 kb on - strand, within EX28DRAFT_0825 at 830.345 kb on + strand at 830.419 kb on + strand at 830.420 kb on - strand at 830.423 kb on + strand at 830.424 kb on - strand at 830.433 kb on - strand at 830.482 kb on - strand at 830.482 kb on - strand at 830.482 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 827,756 - -0.4 827,972 + EX28DRAFT_0824 0.26 -0.5 827,972 + EX28DRAFT_0824 0.26 -0.2 827,973 - EX28DRAFT_0824 0.27 -1.2 827,973 - EX28DRAFT_0824 0.27 +0.5 827,973 - EX28DRAFT_0824 0.27 +0.4 827,976 + EX28DRAFT_0824 0.27 -0.1 827,977 - EX28DRAFT_0824 0.27 -2.7 828,065 + EX28DRAFT_0824 0.35 -0.6 828,065 + EX28DRAFT_0824 0.35 +0.7 828,072 + EX28DRAFT_0824 0.36 -0.6 828,072 + EX28DRAFT_0824 0.36 +1.0 828,072 + EX28DRAFT_0824 0.36 +0.5 828,072 + EX28DRAFT_0824 0.36 -1.0 828,072 + EX28DRAFT_0824 0.36 -0.5 828,073 - EX28DRAFT_0824 0.36 -0.0 828,073 - EX28DRAFT_0824 0.36 -0.2 828,073 - EX28DRAFT_0824 0.36 +0.1 828,076 + EX28DRAFT_0824 0.36 -0.2 828,195 + EX28DRAFT_0824 0.47 -0.9 828,195 + EX28DRAFT_0824 0.47 +0.1 828,195 + EX28DRAFT_0824 0.47 -2.4 828,195 + EX28DRAFT_0824 0.47 +0.2 828,195 + EX28DRAFT_0824 0.47 +0.9 828,196 - EX28DRAFT_0824 0.48 +0.8 828,388 - EX28DRAFT_0824 0.66 +0.1 828,398 + EX28DRAFT_0824 0.67 +0.1 828,399 - EX28DRAFT_0824 0.67 +0.2 828,409 + EX28DRAFT_0824 0.68 +1.0 828,409 + EX28DRAFT_0824 0.68 -1.0 828,410 - EX28DRAFT_0824 0.68 +0.2 828,410 - EX28DRAFT_0824 0.68 +0.3 828,448 + EX28DRAFT_0824 0.71 -1.1 828,491 + EX28DRAFT_0824 0.75 -2.3 828,578 - EX28DRAFT_0824 0.84 +0.7 828,770 + +0.6 828,771 - +0.1 829,426 - EX28DRAFT_0825 0.41 +1.1 829,563 + EX28DRAFT_0825 0.49 -0.1 829,701 - EX28DRAFT_0825 0.57 +1.0 829,744 - EX28DRAFT_0825 0.60 +0.4 829,916 + EX28DRAFT_0825 0.70 +0.2 829,980 + EX28DRAFT_0825 0.74 +2.3 829,983 + EX28DRAFT_0825 0.74 +0.6 829,983 + EX28DRAFT_0825 0.74 +0.7 829,983 + EX28DRAFT_0825 0.74 -0.3 830,025 + EX28DRAFT_0825 0.77 -0.0 830,026 - EX28DRAFT_0825 0.77 +3.6 830,027 + EX28DRAFT_0825 0.77 -0.3 830,027 + EX28DRAFT_0825 0.77 +0.0 830,028 - EX28DRAFT_0825 0.77 +1.0 830,345 + -0.1 830,419 + +0.6 830,420 - -0.2 830,423 + +0.1 830,424 - -0.2 830,433 - -0.8 830,482 - -2.0 830,482 - +0.2 830,482 - -0.2
Or see this region's nucleotide sequence